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rad3 ATR checkpoint kinase Rad3 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540719, updated on 22-Sep-2022

Summary

Gene symbol
rad3
Gene description
ATR checkpoint kinase Rad3
Locus tag
SPBC216.05
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

See rad3 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (903253..913629)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene dynein-anchoring factor Mcp5/Num1 Neighboring gene uncharacterized protein Neighboring gene putative methionine sulfoxide Neighboring gene replication fork protection complex subunit Swi1 Neighboring gene phosphatidylinositol kinase Tor2 Neighboring gene protein Cwf11 Neighboring gene miscRNA Neighboring gene putative glutamyl-tRNA amidotransferase alpha subunit

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables histone H2AS121 kinase activity EXP
Inferred from Experiment
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein serine/threonine kinase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein serine/threonine kinase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables protein serine/threonine kinase activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of ATR-ATRIP complex IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in chromatin IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in chromosome, telomeric repeat region IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in cytosol HDA PubMed 
is_active_in nuclear chromosome IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleolus IDA
Inferred from Direct Assay
more info
PubMed 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    903253..913629
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021264.2NP_595357.1  ATR checkpoint kinase Rad3 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595357.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q02099, Q9UUM1
    Conserved Domains (4) summary
    smart00802
    Location:862968
    UME; Domain in UVSB PI-3 kinase, MEI-41 and ESR-1
    COG5032
    Location:1772386
    TEL1; Phosphatidylinositol kinase or protein kinase, PI-3 family [Signal transduction mechanisms]
    cd00892
    Location:20512322
    PIKKc_ATR; Catalytic domain of Ataxia telangiectasia and Rad3-related proteins
    pfam02260
    Location:23552386
    FATC; FATC domain