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SPBC216.04c putative methionine sulfoxide [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2540772, updated on 17-May-2024

Summary

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Gene symbol
SPBC216.04c
Gene description
putative methionine sulfoxide
Primary source
PomBase:SPBC216.04c
Locus tag
SPBC216.04c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SPBC216.04c in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (902993..903572, complement)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene dynein-anchoring factor Mcp5/Num1 Neighboring gene uncharacterized protein Neighboring gene ATR checkpoint kinase Rad3 Neighboring gene replication fork protection complex subunit Swi1 Neighboring gene phosphatidylinositol kinase Tor2 Neighboring gene protein Cwf11

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Methionine sulphoxide reductases revisited: free methionine as a primary target of H₂O₂stress in auxotrophic fission yeast. García-Santamarina S, et al. Mol Microbiol, 2013 Dec. PMID 24118096
  2. A Proteome-wide Fission Yeast Interactome Reveals Network Evolution Principles from Yeasts to Human. Vo TV, et al. Cell, 2016 Jan 14. PMID 26771498, Free PMC Article
  3. Hierarchical modularity and the evolution of genetic interactomes across species. Ryan CJ, et al. Mol Cell, 2012 Jun 8. PMID 22681890, Free PMC Article
  4. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  5. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables peptide-methionine (R)-S-oxide reductase activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in cellular detoxification IC
Inferred by Curator
more info
  
involved_in protein repair ISS
Inferred from Sequence or Structural Similarity
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in nucleus HDA PubMed 

General protein information

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Preferred Names
putative methionine sulfoxide

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    902993..903572 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021263.2 → NP_595356.1  putative methionine sulfoxide [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595356.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q9Y7K1
    UniProtKB/TrEMBL
    J9USB3
    Conserved Domains (1) summary
    COG0229
    Location:5 → 137
    MsrB; Peptide methionine sulfoxide reductase MsrB [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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