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SPBC646.03 putative glutamyl-tRNA amidotransferase alpha subunit [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541102, updated on 17-May-2024

Summary

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Gene symbol
SPBC646.03
Gene description
putative glutamyl-tRNA amidotransferase alpha subunit
Primary source
PomBase:SPBC646.03
Locus tag
SPBC646.03
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See SPBC646.03 in Genome Data Viewer
Location:
chromosome: II
Exon count:
3
Sequence:
Chromosome: II; NC_003423.3 (926760..928797)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ATR checkpoint kinase Rad3 Neighboring gene replication fork protection complex subunit Swi1 Neighboring gene phosphatidylinositol kinase Tor2 Neighboring gene protein Cwf11 Neighboring gene miscRNA Neighboring gene poly(A) polymerase Pla1 Neighboring gene putative squalene synthase Erg9 Neighboring gene glucan endo-1,3-alpha-glucosidase Agn2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ORFeome cloning and global analysis of protein localization in the fission yeast Schizosaccharomyces pombe. Matsuyama A, et al. Nat Biotechnol, 2006 Jul. PMID 16823372
  2. The genome sequence of Schizosaccharomyces pombe. Wood V, et al. Nature, 2002 Feb 21. PMID 11859360
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glutaminyl-tRNAGln biosynthesis via transamidation IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in mitochondrial translation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm HDA PubMed 
part_of glutamyl-tRNA(Gln) amidotransferase complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in mitochondrial matrix IC
Inferred by Curator
more info
  
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
putative glutamyl-tRNA amidotransferase alpha subunit

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    926760..928797
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021269.2 → NP_595361.1  putative glutamyl-tRNA amidotransferase alpha subunit [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595361.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94509
    Conserved Domains (1) summary
    cl18951
    Location:12 → 470
    Amidase; Amidase
Nucleotide Protein
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