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cwf11 protein Cwf11 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2541124, updated on 17-May-2024

Summary

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Gene symbol
cwf11
Gene description
protein Cwf11
Primary source
PomBase:SPBC646.02
Locus tag
SPBC646.02
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See cwf11 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_003423.3 (922395..926641)

Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene putative methionine sulfoxide Neighboring gene ATR checkpoint kinase Rad3 Neighboring gene replication fork protection complex subunit Swi1 Neighboring gene phosphatidylinositol kinase Tor2 Neighboring gene miscRNA Neighboring gene putative glutamyl-tRNA amidotransferase alpha subunit Neighboring gene poly(A) polymerase Pla1 Neighboring gene putative squalene synthase Erg9

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003423.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interacting factors and cellular localization of SR protein-specific kinase Dsk1. Tang Z, et al. Exp Cell Res, 2012 Oct 1. PMID 22683458
  2. Structure of a yeast spliceosome at 3.6-angstrom resolution. Yan C, et al. Science, 2015 Sep 11. PMID 26292707
  3. Mtr4-like protein coordinates nuclear RNA processing for heterochromatin assembly and for telomere maintenance. Lee NN, et al. Cell, 2013 Nov 21. PMID 24210919, Free PMC Article
  4. Poly(A) tail-mediated gene regulation by opposing roles of Nab2 and Pab2 nuclear poly(A)-binding proteins in pre-mRNA decay. Grenier St-Sauveur V, et al. Mol Cell Biol, 2013 Dec. PMID 24081329, Free PMC Article
  5. Identification of proteins associated with splicing factors Ntr1, Ntr2, Brr2 and Gpl1 in the fission yeast Schizosaccharomyces pombe. Cipakova I, et al. Cell Cycle, 2019 Jul. PMID 31219728, Free PMC Article

See all (22) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables mRNA binding IBA
Inferred from Biological aspect of Ancestor
more info
  
enables protein binding IPI
Inferred from Physical Interaction
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA cis splicing, via spliceosome IC
Inferred by Curator
more info
 PubMed 
Component Evidence Code Pubs
part_of Prp19 complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of U2-type spliceosomal complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of catalytic step 2 spliceosome IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of post-mRNA release spliceosomal complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of spliceosomal complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
protein Cwf11

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003423.3 Reference assembly

    Range
    922395..926641
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001021268.2 → NP_595360.1  protein Cwf11 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_595360.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O94508
    Conserved Domains (2) summary
    cd18808
    Location:1049 → 1234
    SF1_C_Upf1; C-terminal helicase domain of Upf1-like family helicases
    cd17935
    Location:722 → 1061
    EEXXQc_AQR; EEXXQ-box helicase domain of AQR
Nucleotide Protein
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