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rps101 40S ribosomal protein S1 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2542817, updated on 7-Apr-2024

Summary

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Gene symbol
rps101
Gene description
40S ribosomal protein S1
Locus tag
SPAC13G6.02c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rps1-1; rps3a-1
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Genomic context

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See rps101 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (174865..176655, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene putative acetylglucosaminyltransferase Neighboring gene putative alpha-1,2-galactosyltransferase Gmh2 Neighboring gene miscRNA Neighboring gene ubiquitin-protein ligase E3 Rad8 Neighboring gene miscRNA Neighboring gene miscRNA Neighboring gene putative GPI anchor biosynthesis protein Gpi7 Neighboring gene putative TIM22 inner membrane protein import complex subunit Tim8 Neighboring gene putative TRAPP complex subunit Trs33

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Analysis of stress granule assembly in Schizosaccharomyces pombe. Wang CY, et al. RNA, 2012 Apr. PMID 22328580, Free PMC Article
  2. Proteomic and functional analysis of the noncanonical poly(A) polymerase Cid14. Keller C, et al. RNA, 2010 Jun. PMID 20403971, Free PMC Article
  3. A Two-step Protein Quality Control Pathway for a Misfolded DJ-1 Variant in Fission Yeast. Mathiassen SG, et al. J Biol Chem, 2015 Aug 21. PMID 26152728, Free PMC Article
  4. Posttranslational Arginylation Enzyme Arginyltransferase1 Shows Genetic Interactions With Specific Cellular Pathways in vivo. Wiley DJ, et al. Front Physiol, 2020. PMID 32435206, Free PMC Article
  5. Proximity-dependent biotinylation mediated by TurboID to identify protein-protein interaction networks in yeast. Larochelle M, et al. J Cell Sci, 2019 May 31. PMID 31064814

See all (16) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

regulatory

  • Loc: c175833-175826 regulatory_class = promoter

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables structural constituent of ribosome ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in cytoplasmic translation ISO
Inferred from Sequence Orthology
more info
  
involved_in ribosome biogenesis ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
is_active_in cytosol HDA PubMed 
is_active_in cytosol IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
40S ribosomal protein S1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    174865..176655 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001018229.2 → NP_592828.1  40S ribosomal protein S1 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_592828.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    Q09781, Q9US76
    Conserved Domains (1) summary
    COG1890
    Location:10 → 240
    RPS3A; Ribosomal protein S3AE [Translation, ribosomal structure and biogenesis]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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