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rhp51 RecA family recombinase Rhp51 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 2543580, updated on 22-Sep-2022

Summary

Gene symbol
rhp51
Gene description
RecA family recombinase Rhp51
Locus tag
SPAC644.14c
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
Also known as
rad51
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Genomic context

See rhp51 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (2698110..2700283, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene putative Rab GTPase-binding protein Neighboring gene splicing factor Cdc5 Neighboring gene 60S acidic ribosomal protein P1 Neighboring gene putative RNA-binding protein Neighboring gene putative mitochondrial ribosomal protein subunit L9

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the rhp51 gene: The rhp51 gene is conserved in human, chimpanzee, Rhesus monkey, dog, cow, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, M.oryzae, N.crassa, A.thaliana, rice, and frog.

Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables ATP binding IDA
Inferred from Direct Assay
more info
PubMed 
enables ATP hydrolysis activity NAS
Non-traceable Author Statement
more info
 
enables ATP-dependent DNA damage sensor activity IEA
Inferred from Electronic Annotation
more info
 
enables ATP-dependent activity, acting on DNA IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables ATP-dependent activity, acting on DNA IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA strand exchange activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables DNA strand exchange activity IDA
Inferred from Direct Assay
more info
PubMed 
enables Swi5-Sfr1 complex binding IDA
Inferred from Direct Assay
more info
PubMed 
enables Swi5-Sfr1 complex binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables double-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables double-stranded DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables single-stranded DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables single-stranded DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in DNA recombinase assembly IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in DNA recombinase assembly IDA
Inferred from Direct Assay
more info
PubMed 
involved_in chromosome organization involved in meiotic cell cycle IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in double-strand break repair involved in meiotic recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in double-strand break repair via homologous recombination IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in interstrand cross-link repair IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in mating type switching IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in meiotic strand invasion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in mitotic recombination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitotic recombination IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in mitotic recombination-dependent replication fork processing IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in reciprocal meiotic recombination IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in replication fork processing EXP
Inferred from Experiment
more info
PubMed 
involved_in stalled replication fork localization to nuclear periphery IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in strand invasion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in strand invasion IDA
Inferred from Direct Assay
more info
PubMed 
involved_in telomere maintenance IGI
Inferred from Genetic Interaction
more info
PubMed 

General protein information

Preferred Names
RecA family recombinase Rhp51

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    2698110..2700283 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001019312.2NP_593882.1  RecA family recombinase Rhp51 [Schizosaccharomyces pombe]

    See identical proteins and their annotated locations for NP_593882.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P36601
    Conserved Domains (3) summary
    cd01123
    Location:124356
    Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...
    TIGR02239
    Location:47360
    recomb_RAD51; DNA repair protein RAD51
    pfam14520
    Location:53102
    HHH_5; Helix-hairpin-helix domain