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TBX5-AS1 TBX5 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 255480, updated on 11-Sep-2021

Summary

Official Symbol
TBX5-AS1provided by HGNC
Official Full Name
TBX5 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27402
See related
Ensembl:ENSG00000255399
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in placenta (RPKM 8.9), lung (RPKM 6.6) and 5 other tissues See more
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Genomic context

See TBX5-AS1 in Genome Data Viewer
Location:
12q24.21
Exon count:
3
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (114408195..114412832)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (114846000..114850637)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 11920 Neighboring gene CRE9 enhancer downstream of TBX5 Neighboring gene T-box transcription factor 5 Neighboring gene uncharacterized LOC105369998 Neighboring gene CRE16 enhancer upstream of TBX5 Neighboring gene RN7SK pseudogene 216

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Other Names

  • TBX5 antisense RNA 1 (non-protein coding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038440.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC069240, AK091766, BM970213, CB992854
    Related
    ENST00000655553.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    114408195..114412832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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