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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_013070.2 → NP_037202.2 utrophin
Status: PROVISIONAL
- Source sequence(s)
-
JAXUCZ010000001
- UniProtKB/Swiss-Prot
-
G3V7L1
- UniProtKB/TrEMBL
-
O55147
- Related
- ENSRNOP00000016273.7, ENSRNOT00000016273.6
- Conserved Domains (8) summary
-
- cd00176
Location:310 → 528
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2804 → 2832
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3055 → 3103
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- TIGR02168
Location:880 → 1827
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd16247
Location:2869 → 3030
- EFh_UTRO; EF-hand-like motif found in utrophin
- cd21232
Location:31 → 137
- CH_UTRN_rpt1; first calponin homology (CH) domain found in utrophin and similar proteins
- cd21234
Location:152 → 255
- CH_UTRN_rpt2; second calponin homology (CH) domain found in utrophin and similar proteins
- cl02488
Location:543 → 646
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086019.1 Reference GRCr8
- Range
-
8541061..9044487 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_008758594.4 → XP_008756816.1 utrophin isoform X2
See identical proteins and their annotated locations for XP_008756816.1
- UniProtKB/Swiss-Prot
-
G3V7L1
- UniProtKB/TrEMBL
-
O55147
- Conserved Domains (8) summary
-
- cd00176
Location:310 → 528
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2804 → 2832
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3055 → 3103
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- TIGR02168
Location:880 → 1827
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd16247
Location:2869 → 3030
- EFh_UTRO; EF-hand-like motif found in utrophin
- cd21232
Location:31 → 137
- CH_UTRN_rpt1; first calponin homology (CH) domain found in utrophin and similar proteins
- cd21234
Location:152 → 255
- CH_UTRN_rpt2; second calponin homology (CH) domain found in utrophin and similar proteins
- cl02488
Location:543 → 646
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_008758593.3 → XP_008756815.1 utrophin isoform X2
See identical proteins and their annotated locations for XP_008756815.1
- UniProtKB/Swiss-Prot
-
G3V7L1
- UniProtKB/TrEMBL
-
O55147
- Conserved Domains (8) summary
-
- cd00176
Location:310 → 528
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2804 → 2832
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3055 → 3103
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- TIGR02168
Location:880 → 1827
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd16247
Location:2869 → 3030
- EFh_UTRO; EF-hand-like motif found in utrophin
- cd21232
Location:31 → 137
- CH_UTRN_rpt1; first calponin homology (CH) domain found in utrophin and similar proteins
- cd21234
Location:152 → 255
- CH_UTRN_rpt2; second calponin homology (CH) domain found in utrophin and similar proteins
- cl02488
Location:543 → 646
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_063281961.1 → XP_063138031.1 utrophin isoform X5
-
XM_039101949.2 → XP_038957877.1 utrophin isoform X6
- UniProtKB/TrEMBL
-
O55147
- Conserved Domains (8) summary
-
- cd00176
Location:255 → 473
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2749 → 2777
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3000 → 3048
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- TIGR02168
Location:825 → 1772
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd16247
Location:2814 → 2975
- EFh_UTRO; EF-hand-like motif found in utrophin
- cd21234
Location:97 → 200
- CH_UTRN_rpt2; second calponin homology (CH) domain found in utrophin and similar proteins
- cl00030
Location:1 → 82
- CH_SF; calponin homology (CH) domain superfamily
- cl02488
Location:488 → 591
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_039101947.2 → XP_038957875.1 utrophin isoform X6
- UniProtKB/TrEMBL
-
O55147
- Conserved Domains (8) summary
-
- cd00176
Location:255 → 473
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2749 → 2777
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3000 → 3048
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- TIGR02168
Location:825 → 1772
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd16247
Location:2814 → 2975
- EFh_UTRO; EF-hand-like motif found in utrophin
- cd21234
Location:97 → 200
- CH_UTRN_rpt2; second calponin homology (CH) domain found in utrophin and similar proteins
- cl00030
Location:1 → 82
- CH_SF; calponin homology (CH) domain superfamily
- cl02488
Location:488 → 591
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_008758596.4 → XP_008756818.1 utrophin isoform X4
- UniProtKB/TrEMBL
- A0A8I5ZYU2, O55147
- Related
-
ENSRNOP00000085259.1
- Conserved Domains (7) summary
-
- cd00014
Location:23 → 126
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:301 → 519
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2795 → 2823
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3046 → 3094
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09068
Location:2824 → 2942
- EF-hand_2; EF hand
- pfam09069
Location:2946 → 3037
- EF-hand_3; EF-hand
- cl02488
Location:903 → 1114
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_063281964.1 → XP_063138034.1 utrophin isoform X6
-
XM_008758595.4 → XP_008756817.1 utrophin isoform X3
- UniProtKB/TrEMBL
-
A0A8I6AG96
- Conserved Domains (7) summary
-
- cd00014
Location:37 → 140
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:315 → 533
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2809 → 2837
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3060 → 3108
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09068
Location:2838 → 2956
- EF-hand_2; EF hand
- pfam09069
Location:2960 → 3051
- EF-hand_3; EF-hand
- cl02488
Location:917 → 1128
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_006227637.5 → XP_006227699.1 utrophin isoform X1
- UniProtKB/TrEMBL
- A0A0G2JW60, O55147
- Related
-
ENSRNOP00000069754.1
- Conserved Domains (7) summary
-
- cd00014
Location:37 → 140
- CH; Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity). The CH domain is found in cytoskeletal and signal transduction proteins, including actin-binding proteins like ...
- cd00176
Location:315 → 533
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2809 → 2837
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:3060 → 3108
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09068
Location:2838 → 2956
- EF-hand_2; EF hand
- pfam09069
Location:2960 → 3051
- EF-hand_3; EF-hand
- cl02488
Location:917 → 1128
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_039101956.2 → XP_038957884.1 utrophin isoform X8
- UniProtKB/TrEMBL
-
O55147
- Conserved Domains (6) summary
-
- cd00176
Location:1 → 173
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:2449 → 2477
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:2700 → 2748
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- TIGR02168
Location:525 → 1472
- SMC_prok_B; chromosome segregation protein SMC, common bacterial type
- cd16247
Location:2514 → 2675
- EFh_UTRO; EF-hand-like motif found in utrophin
- cl02488
Location:188 → 291
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
-
XM_063281985.1 → XP_063138055.1 utrophin isoform X12
-
XM_008758598.4 → XP_008756820.1 utrophin isoform X10
- UniProtKB/TrEMBL
-
A0A8I6AE90
- Related
-
ENSRNOP00000092740.1
- Conserved Domains (6) summary
-
- cd00176
Location:44 → 245
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:372 → 400
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:623 → 671
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09068
Location:401 → 519
- EF-hand_2; EF hand
- pfam09069
Location:523 → 614
- EF-hand_3; EF-hand
- cl02600
Location:873 → 909
- HTH_MerR-SF; Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily
-
XM_063281990.1 → XP_063138060.1 utrophin isoform X13
-
XM_008758599.4 → XP_008756821.1 utrophin isoform X11
- UniProtKB/TrEMBL
-
A0A8I5ZS09
- Related
-
ENSRNOP00000080968.1
- Conserved Domains (6) summary
-
- cd00176
Location:7 → 214
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd00201
Location:341 → 369
- WW; Two conserved tryptophans domain; also known as the WWP or rsp5 domain; around 40 amino acids; functions as an interaction module in a diverse set of signalling proteins; binds specific proline-rich sequences but at low affinities compared to other ...
- cd02334
Location:592 → 640
- ZZ_dystrophin; Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane ...
- pfam09068
Location:370 → 488
- EF-hand_2; EF hand
- pfam09069
Location:492 → 583
- EF-hand_3; EF-hand
- cl02600
Location:842 → 878
- HTH_MerR-SF; Helix-Turn-Helix DNA binding domain of transcription regulators from the MerR superfamily
-
XM_063281969.1 → XP_063138039.1 utrophin isoform X7
-
XM_039101962.2 → XP_038957890.1 utrophin isoform X9
- Conserved Domains (4) summary
-
- cd00176
Location:315 → 533
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
- cd21232
Location:36 → 142
- CH_UTRN_rpt1; first calponin homology (CH) domain found in utrophin and similar proteins
- cd21234
Location:157 → 260
- CH_UTRN_rpt2; second calponin homology (CH) domain found in utrophin and similar proteins
- cl02488
Location:2222 → 2426
- SPEC; Spectrin repeats, found in several proteins involved in cytoskeletal structure; family members include spectrin, alpha-actinin and dystrophin; the spectrin repeat forms a three helix bundle with the second helix interrupted by proline in some sequences; ...
RNA
-
XR_010063620.1 RNA Sequence