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CFAP184 cilia and flagella associated protein 184 [ Homo sapiens (human) ]

Gene ID: 257236, updated on 5-Mar-2024

Summary

Official Symbol
CFAP184provided by HGNC
Official Full Name
cilia and flagella associated protein 184provided by HGNC
Primary source
HGNC:HGNC:26900
See related
Ensembl:ENSG00000173013 MIM:619347; AllianceGenome:HGNC:26900
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CCDC96
Summary
Predicted to be involved in cilium assembly. Predicted to be active in axoneme and ciliary basal body. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See CFAP184 in Genome Data Viewer
Location:
4p16.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (7040849..7043001, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (7012684..7014836, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (7042576..7044728, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15237 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15238 Neighboring gene KIAA0232 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15239 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:6894345-6894901 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:6902995-6903643 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:6903699-6903925 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15240 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21263 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6917519-6918483 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6918484-6919448 Neighboring gene TBC1 domain family member 14 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:6937591-6937729 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15241 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6941327-6941904 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6941905-6942482 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21265 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:6944645-6945470 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6945471-6946296 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6946297-6947122 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:6961085-6961585 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21266 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6972505-6973142 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6974420-6975057 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr4:6975058-6975696 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6987679-6988438 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:6988439-6989198 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21269 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr4:7009000-7009638 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr4:7009639-7010278 Neighboring gene RN7SK pseudogene 292 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21270 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:7017555-7018058 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:7018059-7018562 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:7023455-7024032 Neighboring gene uncharacterized LOC100129931 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15243 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15244 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15245 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21271 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21272 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21273 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:7048917-7049418 Neighboring gene uncharacterized LOC105374368 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:7067016-7067117 Neighboring gene transcriptional adaptor 2B Neighboring gene GrpE like 1, mitochondrial

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Clone Names

  • FLJ90575, MGC138479

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in cilium assembly IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in axoneme IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 
is_active_in ciliary basal body IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 96
Names
coiled-coil domain containing 96

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_153376.3NP_699207.1  coiled-coil domain-containing protein 96

    See identical proteins and their annotated locations for NP_699207.1

    Status: VALIDATED

    Source sequence(s)
    AC097382
    Consensus CDS
    CCDS3395.1
    UniProtKB/Swiss-Prot
    Q2M329, Q8N2I7
    Related
    ENSP00000309285.4, ENST00000310085.6
    Conserved Domains (1) summary
    pfam13870
    Location:365541
    DUF4201; Domain of unknown function (DUF4201)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    7040849..7043001 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    7012684..7014836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)