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SdicC Sperm-specific dynein intermediate chain C [ Drosophila melanogaster (fruit fly) ]

Gene ID: 26067076, updated on 5-Jan-2022

Summary

Official Symbol
SdicCprovided by FlyBase
Official Full Name
Sperm-specific dynein intermediate chain Cprovided by FlyBase
Primary source
FLYBASE:FBgn0283434
Locus tag
Dmel_CG46277
Gene type
protein coding
RNA name
Sperm-specific dynein intermediate chain C
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG46277; Dmel\CG46277
Summary
Predicted to enable dynein heavy chain binding activity and dynein light chain binding activity. Predicted to be involved in transport along microtubule. Predicted to be part of cytoplasmic dynein complex. Orthologous to human DYNC1I2 (dynein cytoplasmic 1 intermediate chain 2). [provided by Alliance of Genome Resources, Nov 2021]
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Genomic context

See SdicC in Genome Data Viewer
Location:
19C1-19C1; 1-64 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (20212738..20217259, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene Sperm-specific dynein intermediate chain B Neighboring gene pseudo Neighboring gene pseudo Neighboring gene Sperm-specific dynein intermediate chain 4

Genomic regions, transcripts, and products

Genomic Sequence:
NC_004354.4 Chromosome X Reference Release 6 plus ISO1 MT Primary Assembly

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables dynein heavy chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables dynein light chain binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in microtubule-based movement IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in transport along microtubule IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of cytoplasmic dynein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
Sperm-specific dynein intermediate chain C
Names
CG46277-PA
SdicC-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    20212738..20217259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001316649.1NP_001303578.1  Sperm-specific dynein intermediate chain C [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    T2FGB0
    Related
    FBpp0401438, FBtr0445174
    Conserved Domains (5) summary
    COG2319
    Location:224534
    WD40; WD40 repeat [General function prediction only]
    COG2811
    Location:108178
    NtpH; Archaeal/vacuolar-type H+-ATPase subunit H [Energy production and conversion]
    pfam11540
    Location:2351
    Dynein_IC2; Cytoplasmic dynein 1 intermediate chain 2
    sd00039
    Location:196245
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:196523
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
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