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lncRNA:CR43174 long non-coding RNA:CR43174 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 26067100, updated on 29-Dec-2023

Summary

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Official Symbol
lncRNA:CR43174provided by FlyBase
Official Full Name
long non-coding RNA:CR43174provided by FlyBase
Primary source
FLYBASE:FBgn0267794
Locus tag
Dmel_CR43174
See related
AllianceGenome:FB:FBgn0267794
Gene type
ncRNA
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG43173; CG43174; CR43173; CR43174; Dmel\CR43174; mdcds_28406
Summary
Is expressed in antennal disc; eye disc; ventral thoracic disc; and wing disc. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
75A9-75A10; 3-45 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17934032..17946114)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene prestin Neighboring gene uncharacterized protein Neighboring gene WD repeat domain 92 Neighboring gene long non-coding RNA:CR45393 Neighboring gene Ecdysone-induced protein 75B Neighboring gene long non-coding RNA:CR45921

Genomic regions, transcripts, and products

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Genomic Sequence:
NT_037436.4 Chromosome 3L Reference Release 6 plus ISO1 MT Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. New components of Drosophila leg development identified through genome wide association studies. Grubbs N, et al. PLoS One, 2013. PMID 23560084, Free PMC Article
  2. Diverse and pervasive subcellular distributions for both coding and long noncoding RNAs. Wilk R, et al. Genes Dev, 2016 Mar 1. PMID 26944682, Free PMC Article
  3. Comparative Expression Dynamics of Intergenic Long Noncoding RNAs in the Genus Drosophila. Nyberg KG, et al. Genome Biol Evol, 2016 Jun 27. PMID 27189981, Free PMC Article
  4. Drosophila muller f elements maintain a distinct set of genomic properties over 40 million years of evolution. Leung W, et al. G3 (Bethesda), 2015 Mar 4. PMID 25740935, Free PMC Article
  5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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  • lncRNA:CR43174-RB; Dmel\lncRNA:CR43174-RB; CR43174-RB; Dmel\CR43174-RB
  • lncRNA:CR43174-RC; Dmel\lncRNA:CR43174-RC; CR43174-RC; Dmel\CR43174-RC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17934032..17946114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_133259.1 RNA Sequence

    Status: REVIEWED

  2. NR_133260.1 RNA Sequence

    Status: REVIEWED

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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