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mt-Atp6 ATP synthase 6, mitochondrial [ Rattus norvegicus (Norway rat) ]

Gene ID: 26197, updated on 29-Sep-2021

Summary

Official Symbol
mt-Atp6provided by RGD
Official Full Name
ATP synthase 6, mitochondrialprovided by RGD
Primary source
RGD:621239
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus (strain: BN/SsNHsdMCW)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
ATP6
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Genomic context

See mt-Atp6 in Genome Data Viewer
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) MT (non-nuclear) NC_001665.2 (7919..8599)
106 previous assembly Rnor_6.0 (GCF_000001895.5) MT (non-nuclear) NC_001665.2 (7919..8599)

Chromosome MT - NC_001665.2Genomic Context describing neighboring genes Neighboring gene COXII Neighboring gene tRNA Neighboring gene ATPase subunit 8 Neighboring gene cytochrome c oxidase subunit 3 Neighboring gene tRNA

Genomic regions, transcripts, and products

Bibliography

Pathways from PubChem

General gene information

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
contributes_to proton-transporting ATP synthase activity, rotational mechanism ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in ATP synthesis coupled proton transport IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in aging IEP
Inferred from Expression Pattern
more info
PubMed 
involved_in mitochondrial ATP synthesis coupled proton transport ISO
Inferred from Sequence Orthology
more info
 
involved_in response to hyperoxia IEP
Inferred from Expression Pattern
more info
PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
part_of mitochondrial proton-transporting ATP synthase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of mitochondrial proton-transporting ATP synthase complex ISO
Inferred from Sequence Orthology
more info
 
part_of mitochondrial proton-transporting ATP synthase complex ISS
Inferred from Sequence or Structural Similarity
more info
 
part_of proton-transporting ATP synthase complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ATPase subunit 6
Names
ATP synthase F0 subunit 6

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001665.2 Reference assembly

    Range
    7919..8599
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_665634.1 ATP synthase F0 subunit 6 (mitochondrion) [Rattus norvegicus]

    See identical proteins and their annotated locations for YP_665634.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P05504
    UniProtKB/TrEMBL
    Q8HIC7
    Related
    ENSRNOP00000049769.3
    Conserved Domains (1) summary
    MTH00101
    Location:1226
    ATP6; ATP synthase F0 subunit 6; Validated
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