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Ceacam9 CEA cell adhesion molecule 9 [ Mus musculus (house mouse) ]

Gene ID: 26368, updated on 8-Feb-2024

Summary

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Official Symbol
Ceacam9provided by MGI
Official Full Name
CEA cell adhesion molecule 9provided by MGI
Primary source
MGI:MGI:1347247
See related
Ensembl:ENSMUSG00000007209 AllianceGenome:MGI:1347247
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Cea5; Cea-5; mmCGM8
Summary
Predicted to be located in apical plasma membrane. Is expressed in placenta and primary trophoblast giant cell. Orthologous to several human genes including CEACAM21 (CEA cell adhesion molecule 21). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Restricted expression toward placenta adult (RPKM 28.0) See more
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Genomic context

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Location:
7 A2; 7 9.15 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (16455854..16460035)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (16721929..16726110)

Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 8209 Neighboring gene 40S RIBOSOMAL PROTEIN S3A (V-FOS TRANSFORMATION EFFECTOR PROTEIN) Neighboring gene STARR-positive B cell enhancer ABC_E3700 Neighboring gene STARR-positive B cell enhancer ABC_E4899 Neighboring gene STARR-positive B cell enhancer ABC_E6517 Neighboring gene adaptor-related protein complex 2, sigma 1 subunit Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17351790-17352086 Neighboring gene STARR-positive B cell enhancer ABC_E694 Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:17368547-17368700 Neighboring gene solute carrier family 1 (neutral amino acid transporter), member 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. cea5, a structurally divergent member of the murine carcinoembryonic antigen gene family, is exclusively expressed during early placental development in trophoblast giant cells. Finkenzeller D, et al. J Biol Chem, 1997 Dec 12. PMID 9395467
  2. Trophoblast cell-specific carcinoembryonic antigen cell adhesion molecule 9 is not required for placental development or a positive outcome of allotypic pregnancies. Finkenzeller D, et al. Mol Cell Biol, 2000 Oct. PMID 10982830, Free PMC Article
  3. Coordinate expression of splice variants of the murine pregnancy-specific glycoprotein (PSG) gene family during placental development. Kromer B, et al. Eur J Biochem, 1996 Dec 1. PMID 8973644
  4. Carcinoembryonic antigen-related cell adhesion molecule 10 expressed specifically early in pregnancy in the decidua is dispensable for normal murine development. Finkenzeller D, et al. Mol Cell Biol, 2003 Jan. PMID 12482980, Free PMC Article
  5. Mouse pregnancy-specific glycoproteins: tissue-specific expression and evidence of association with maternal vasculature. Wynne F, et al. Reproduction, 2006 Apr. PMID 16595723

See all (23) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1)  1 citation
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  

General protein information

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Preferred Names
CEA cell adhesion molecule 9
Names
CEA-related cell adhesion molecule 9
carcinoembryonic antigen 5
carcinoembryonic antigen-related cell adhesion molecule 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_011927.4 → NP_036057.1  CEA cell adhesion molecule 9 precursor

    See identical proteins and their annotated locations for NP_036057.1

    Status: PROVISIONAL

    Source sequence(s)
    AC148981
    Consensus CDS
    CCDS20852.1
    UniProtKB/TrEMBL
    Q78T27
    Related
    ENSMUSP00000001984.4, ENSMUST00000001984.5
    Conserved Domains (3) summary
    cd05774
    Location:35 → 139
    Ig_CEACAM_D1; First immunoglobulin (Ig)-like domain of carcinoembryonic antigen (CEA) related cell adhesion molecule (CEACAM)
    smart00408
    Location:159 → 220
    IGc2; Immunoglobulin C-2 Type
    smart00410
    Location:152 → 219
    IG_like; Immunoglobulin like

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000073.7 Reference GRCm39 C57BL/6J

    Range
    16455854..16460035
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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