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Ifi202b interferon activated gene 202B [ Mus musculus (house mouse) ]

Gene ID: 26388, updated on 6-May-2021

Summary

Official Symbol
Ifi202bprovided by MGI
Official Full Name
interferon activated gene 202Bprovided by MGI
Primary source
MGI:MGI:1347083
See related
Ensembl:ENSMUSG00000026535
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
p20; p202; Ifi202; Ifbip-1; Ifi202a; Ifi202c
Expression
Low expression observed in reference dataset See more
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Genomic context

See Ifi202b in Genome Data Viewer
Location:
1; 1 H3
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 1 NC_000067.7 (173790135..173810410, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 1 NC_000067.6 (173962569..173982844, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 1 NC_000067.5 (175892700..175912975, complement)

Chromosome 1 - NC_000067.7Genomic Context describing neighboring genes Neighboring gene interferon activated gene 211 Neighboring gene interferon activated gene 203 Neighboring gene uncharacterized LOC118567644 Neighboring gene interferon activated gene 204 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
interferon-activable protein 202
Names
Interferon-activatable protein 202a (Ifi-202a) (Interferon-inducible protein p202a)
ifi-202
interferon activated gene 202A
interferon-inducible protein p202
lupus susceptibility protein p202

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008327.2NP_032353.2  interferon-activable protein 202

    See identical proteins and their annotated locations for NP_032353.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC170584, CJ056241, EL957871, M31418
    Consensus CDS
    CCDS35794.1
    UniProtKB/Swiss-Prot
    Q9R002
    Related
    ENSMUSP00000000266.8, ENSMUST00000000266.9
    Conserved Domains (1) summary
    pfam02760
    Location:58223
    HIN; HIN-200/IF120x domain
  2. NM_011940.2NP_036070.2  interferon-activable protein 202

    See identical proteins and their annotated locations for NP_036070.2

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC170584, CJ045697, CJ056241, EL957871, M31418
    Consensus CDS
    CCDS35794.1
    UniProtKB/Swiss-Prot
    Q9R002
    Conserved Domains (1) summary
    pfam02760
    Location:58223
    HIN; HIN-200/IF120x domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000067.7 Reference GRCm39 C57BL/6J

    Range
    173790135..173810410 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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