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OR7E47P olfactory receptor family 7 subfamily E member 47 pseudogene [ Homo sapiens (human) ]

Gene ID: 26628, updated on 11-Jun-2021

Summary

Official Symbol
OR7E47Pprovided by HGNC
Official Full Name
olfactory receptor family 7 subfamily E member 47 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:8421
See related
Ensembl:ENSG00000257542
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
OR7E141
Expression
Broad expression in lung (RPKM 5.5), prostate (RPKM 3.5) and 15 other tissues See more
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Genomic context

See OR7E47P in Genome Data Viewer
Location:
12q13.13
Exon count:
5
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (52084746..52108319)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (52478530..52502103)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene nuclear receptor subfamily 4 group A member 1 Neighboring gene NR4A1 antisense RNA Neighboring gene autophagy related 101 Neighboring gene uncharacterized LOC112268096 Neighboring gene small integral membrane protein 41 Neighboring gene uncharacterized LOC105369771 Neighboring gene Sharpr-MPRA regulatory region 3292 Neighboring gene keratin 80

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_120438.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) shares its 5' terminal exon with variant 2 but contains an alternate 3' exon structure and does not share similarity to olfactory receptor coding sequence.
    Source sequence(s)
    BX100829
    Related
    ENST00000575924.1
  2. NR_120439.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) shares similarity to olfactory receptor coding sequence in its 3' region.
    Source sequence(s)
    AA229829, BC042060, BX100829, DB348459
  3. NR_120440.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) contains an alternate 5' terminal exon compared to variant 1 and shares similarity to olfactory receptor coding sequence in its 3' region.
    Source sequence(s)
    AC078864, DB348459, X87825
    Related
    ENST00000546981.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    52084746..52108319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_004128.3: Suppressed sequence

    Description
    NG_004128.3: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
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