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AVU56_gp5 membrane glycoprotein [ BtRf-AlphaCoV/YN2012 ]

Gene ID: 26628037, updated on 16-Aug-2018

Summary

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Gene symbol
AVU56_gp5
Gene description
membrane glycoprotein
Locus tag
AVU56_gp5
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
BtRf-AlphaCoV/YN2012 (isolate: BtRf-YN2012, nat-host: Rhinolophus ferrumequinum)
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Nidovirales; Coronaviridae; Coronavirinae; Alphacoronavirus; unclassified Alphacoronavirus
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Genomic context

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Sequence:
NC_028824.1 (24585..25271)

NC_028824.1Genomic Context describing neighboring genes Neighboring gene ORF1ab polyprotein Neighboring gene spike glycoprotein Neighboring gene hypothetical protein ORF3 Neighboring gene small envelope protein Neighboring gene nucleocapsid protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_028824.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Deciphering the bat virome catalog to better understand the ecological diversity of bat viruses and the bat origin of emerging infectious diseases. Wu Z, et al. ISME J, 2016 Mar. PMID 26262818, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
membrane glycoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_028824.1 Reference assembly

    Range
    24585..25271
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009200738.1 membrane glycoprotein [BtRf-AlphaCoV/YN2012]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0U1WHF0
    Conserved Domains (1) summary
    pfam01635
    Location:4 → 226
    Corona_M; Coronavirus M matrix/glycoprotein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases