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Klhl38 kelch-like 38 [ Mus musculus (house mouse) ]

Gene ID: 268807, updated on 23-Jun-2021

Summary

Official Symbol
Klhl38provided by MGI
Official Full Name
kelch-like 38provided by MGI
Primary source
MGI:MGI:3045310
See related
Ensembl:ENSMUSG00000022357
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
8230402K04Rik
Expression
Biased expression in heart adult (RPKM 7.9), mammary gland adult (RPKM 1.8) and 5 other tissues See more
Orthologs
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Genomic context

See Klhl38 in Genome Data Viewer
Location:
15; 15 D1
Exon count:
4
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (58176076..58187623, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (58314573..58324169, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (58146128..58155724, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 36112 Neighboring gene F-box protein 32 Neighboring gene predicted gene, 36193 Neighboring gene predicted gene, 53238 Neighboring gene annexin A13 Neighboring gene family with sequence similarity 91, member A1

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177755.3NP_808423.1  kelch-like protein 38

    See identical proteins and their annotated locations for NP_808423.1

    Status: PROVISIONAL

    Source sequence(s)
    AK033353
    Consensus CDS
    CCDS27492.1
    UniProtKB/Swiss-Prot
    Q8BSF5
    Related
    ENSMUSP00000022985.2, ENSMUST00000022985.2
    Conserved Domains (7) summary
    smart00612
    Location:480521
    Kelch; Kelch domain
    PHA03098
    Location:48560
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:373417
    Kelch; KELCH repeat [structural motif]
    pfam00651
    Location:24128
    BTB; BTB/POZ domain
    pfam01344
    Location:510560
    Kelch_1; Kelch motif
    pfam07707
    Location:136237
    BACK; BTB And C-terminal Kelch
    pfam13964
    Location:281321
    Kelch_6; Kelch motif

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    58176076..58187623 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036159434.1XP_036015327.1  kelch-like protein 38 isoform X1

    Conserved Domains (4) summary
    PHA03098
    Location:48438
    PHA03098; kelch-like protein; Provisional
    sd00038
    Location:322370
    Kelch; KELCH repeat [structural motif]
    cd18476
    Location:131229
    BACK_KLHL38; BACK (BTB and C-terminal Kelch) domain found in Kelch-like protein 38 (KLHL38)
    cl38908
    Location:11139
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
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