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Ms4a5 membrane-spanning 4-domains, subfamily A, member 5 [ Mus musculus (house mouse) ]

Gene ID: 269063, updated on 23-Jun-2021

Summary

Official Symbol
Ms4a5provided by MGI
Official Full Name
membrane-spanning 4-domains, subfamily A, member 5provided by MGI
Primary source
MGI:MGI:2670985
See related
Ensembl:ENSMUSG00000054523
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 50.1) See more
Orthologs
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Genomic context

See Ms4a5 in Genome Data Viewer
Location:
19; 19 A
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 19 NC_000085.7 (11251230..11261259, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 19 NC_000085.6 (11273866..11283895, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 19 NC_000085.5 (11348356..11358303, complement)

Chromosome 19 - NC_000085.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930526L06 gene Neighboring gene membrane-spanning 4-domains, subfamily A, member 12 Neighboring gene membrane-spanning 4-domains, subfamily A, member 1 Neighboring gene membrane-spanning 4-domains, subfamily A, member 14 Neighboring gene membrane-spanning 4-domains, subfamily A, member 7

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

General gene information

Homology

Clone Names

  • MGC58438

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_183190.2NP_899013.1  membrane-spanning 4-domains subfamily A member 5

    See identical proteins and their annotated locations for NP_899013.1

    Status: PROVISIONAL

    Source sequence(s)
    AY039036
    Consensus CDS
    CCDS29596.1
    UniProtKB/TrEMBL
    Q810P8
    Related
    ENSMUSP00000066960.7, ENSMUST00000067673.13
    Conserved Domains (1) summary
    pfam04103
    Location:49189
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000085.7 Reference GRCm39 C57BL/6J

    Range
    11251230..11261259 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006527124.4XP_006527187.1  membrane-spanning 4-domains subfamily A member 5 isoform X1

    Conserved Domains (1) summary
    pfam04103
    Location:49147
    CD20; CD20-like family
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