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Slc15a5 solute carrier family 15, member 5 [ Mus musculus (house mouse) ]

Gene ID: 277898, updated on 23-Jun-2021

Summary

Official Symbol
Slc15a5provided by MGI
Official Full Name
solute carrier family 15, member 5provided by MGI
Primary source
MGI:MGI:3607714
See related
Ensembl:ENSMUSG00000044378
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9830102E05Rik
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Slc15a5 in Genome Data Viewer
Location:
6; 6 G1
Exon count:
10
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (137960584..138056914, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (137983586..138079916, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 6 NC_000072.5 (137932111..138028437, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene deoxyribose-phosphate aldolase (putative) Neighboring gene predicted gene, 38552 Neighboring gene microsomal glutathione S-transferase 1 Neighboring gene predicted gene, 30213

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (3) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables symporter activity IEA
Inferred from Electronic Annotation
more info
 
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within peptide transport IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
solute carrier family 15 member 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177787.4NP_808455.2  solute carrier family 15 member 5

    See identical proteins and their annotated locations for NP_808455.2

    Status: PROVISIONAL

    Source sequence(s)
    AC121849, AC132431
    UniProtKB/Swiss-Prot
    Q8CBB2
    Related
    ENSMUSP00000129239.2, ENSMUST00000171804.4
    Conserved Domains (1) summary
    cl21472
    Location:100481
    MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    137960584..138056914 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017321607.2XP_017177096.1  solute carrier family 15 member 5 isoform X1

    Related
    ENSMUST00000050132.10
    Conserved Domains (1) summary
    cl28910
    Location:1398
    MFS; Major Facilitator Superfamily
  2. XM_017321608.2XP_017177097.1  solute carrier family 15 member 5 isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:1322
    MFS; Major Facilitator Superfamily
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