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Exoc3l exocyst complex component 3-like [ Mus musculus (house mouse) ]

Gene ID: 277978, updated on 17-Jul-2021

Summary

Official Symbol
Exoc3lprovided by MGI
Official Full Name
exocyst complex component 3-likeprovided by MGI
Primary source
MGI:MGI:3041195
See related
Ensembl:ENSMUSG00000043251
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Exoc3l1; C730015A04Rik
Expression
Broad expression in ovary adult (RPKM 17.2), lung adult (RPKM 13.6) and 23 other tissues See more
Orthologs
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Genomic context

See Exoc3l in Genome Data Viewer
Location:
8; 8 D3
Exon count:
14
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 8 NC_000074.7 (106016555..106024258, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 8 NC_000074.6 (105289923..105296966, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 8 NC_000074.5 (107813824..107819998, complement)

Chromosome 8 - NC_000074.7Genomic Context describing neighboring genes Neighboring gene heat shock transcription factor 4 Neighboring gene RIKEN cDNA 4931428F04 gene Neighboring gene nucleolar protein 3 (apoptosis repressor with CARD domain) Neighboring gene uncharacterized LOC102636360 Neighboring gene E2F transcription factor 4 Neighboring gene engulfment and cell motility 3 Neighboring gene microRNA 328

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables SNARE binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in exocyst localization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in exocytosis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in exocytosis IDA
Inferred from Direct Assay
more info
PubMed 
involved_in peptide hormone secretion IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 
part_of exocyst IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of exocyst IDA
Inferred from Direct Assay
more info
PubMed 
located_in secretory granule IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
exocyst complex component 3-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001357379.1NP_001344308.1  exocyst complex component 3-like protein isoform 2

    Status: VALIDATED

    Source sequence(s)
    AC124584
    Conserved Domains (1) summary
    cl19885
    Location:1373
    Sec6; Exocyst complex component Sec6
  2. NM_177788.5NP_808456.1  exocyst complex component 3-like protein isoform 1

    See identical proteins and their annotated locations for NP_808456.1

    Status: VALIDATED

    Source sequence(s)
    BC094238, CD564835
    Consensus CDS
    CCDS22597.1
    UniProtKB/Swiss-Prot
    Q8BI71
    Related
    ENSMUSP00000053766.4, ENSMUST00000057855.4
    Conserved Domains (1) summary
    pfam06046
    Location:189722
    Sec6; Exocyst complex component Sec6

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000074.7 Reference GRCm39 C57BL/6J

    Range
    106016555..106024258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036154085.1XP_036009978.1  exocyst complex component 3-like protein isoform X2

    Conserved Domains (1) summary
    cl19885
    Location:1373
    Sec6; Exocyst complex component Sec6
  2. XM_036154084.1XP_036009977.1  exocyst complex component 3-like protein isoform X2

    Conserved Domains (1) summary
    cl19885
    Location:1373
    Sec6; Exocyst complex component Sec6
  3. XM_006531070.4XP_006531133.1  exocyst complex component 3-like protein isoform X1

    See identical proteins and their annotated locations for XP_006531133.1

    UniProtKB/Swiss-Prot
    Q8BI71
    Conserved Domains (1) summary
    pfam06046
    Location:189722
    Sec6; Exocyst complex component Sec6
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