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SCD stearoyl-CoA desaturase [ Bos taurus (cattle) ]

Gene ID: 280924, updated on 6-Sep-2021

Summary

Official Symbol
SCDprovided by VGNC
Official Full Name
stearoyl-CoA desaturaseprovided by VGNC
Primary source
VGNC:VGNC:106916
See related
Ensembl:ENSBTAG00000055207
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
SCD1
Orthologs
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Genomic context

See SCD in Genome Data Viewer
Location:
chromosome: 26
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 26 NC_037353.1 (21263976..21279185)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 26 AC_000183.1 (21137945..21148317, complement)

Chromosome 26 - NC_037353.1Genomic Context describing neighboring genes Neighboring gene centromere protein N pseudogene Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 2 Neighboring gene polycystin 2 like 1, transient receptor potential cation channel Neighboring gene uncharacterized LOC112444487 Neighboring gene Wnt family member 8B

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Homology

Clone Names

  • MGC137456

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables iron ion binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables oxidoreductase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables stearoyl-CoA 9-desaturase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables stearoyl-CoA 9-desaturase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in response to fatty acid IDA
Inferred from Direct Assay
more info
PubMed 
involved_in unsaturated fatty acid biosynthetic process ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in integral component of membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
stearoyl-CoA desaturase
Names
acyl-CoA desaturase
delta(9)-desaturase
fatty acid desaturase
stearoyl-CoA desaturase (delta-9-desaturase)
stearoyl-coenzyme A desaturase
NP_776384.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173959.4NP_776384.3  stearoyl-CoA desaturase

    See identical proteins and their annotated locations for NP_776384.3

    Status: PROVISIONAL

    Source sequence(s)
    AY241933
    UniProtKB/Swiss-Prot
    Q9TT94
    Related
    ENSBTAP00000070213.1, ENSBTAT00000078682.1
    Conserved Domains (1) summary
    cd03505
    Location:97337
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037353.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    21263976..21279185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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