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SPP1 secreted phosphoprotein 1 [ Bos taurus (cattle) ]

Gene ID: 281499, updated on 5-Mar-2024

Summary

Official Symbol
SPP1provided by VGNC
Official Full Name
secreted phosphoprotein 1provided by VGNC
Primary source
VGNC:VGNC:35232
See related
BGD:BT11993; Ensembl:ENSBTAG00000005260
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
OPN; OST
Orthologs
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Genomic context

Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 6 NC_037333.1 (36693204..36700208, complement)

Chromosome 6 - NC_037333.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily G member 2 Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene polycystin 2, transient receptor potential cation channel Neighboring gene uncharacterized LOC112447053 Neighboring gene uncharacterized LOC132345488 Neighboring gene matrix extracellular phosphoglycoprotein

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037333.1 Chromosome 6 Reference ARS-UCD2.0 Primary Assembly

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables extracellular matrix binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cell adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in ossification IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in osteoblast differentiation IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive regulation of bone resorption IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
osteopontin
Names
SPP-1
bone sialoprotein 1
bone sialoprotein I
early T-lymphocyte activation 1
osteopontin-K
secreted phosphoprotein 1 (osteopontin, bone sialoprotein I, early T-lymphocyte activation 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174187.2NP_776612.1  osteopontin precursor

    See identical proteins and their annotated locations for NP_776612.1

    Status: PROVISIONAL

    Source sequence(s)
    M66236
    UniProtKB/TrEMBL
    Q2QCT5
    Conserved Domains (1) summary
    smart00017
    Location:17278
    OSTEO; Osteopontin

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037333.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    36693204..36700208 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024992984.2XP_024848752.1  osteopontin isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MVC9
    Related
    ENSBTAP00000044782.4, ENSBTAT00000047589.4
    Conserved Domains (1) summary
    smart00017
    Location:17251
    OSTEO; Osteopontin