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S100G S100 calcium binding protein G [ Bos taurus (cattle) ]

Gene ID: 281658, updated on 21-Jan-2019

Summary

Official Symbol
S100Gprovided by VGNC
Official Full Name
S100 calcium binding protein Gprovided by VGNC
Primary source
VGNC:VGNC:34249
See related
BGD:BT10159; Ensembl:ENSBTAG00000017020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
CABP; CALB3; S100D
Orthologs

Genomic context

See S100G in Genome Data Viewer
Location:
chromosome: X
Exon count:
3
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) X NC_037357.1 (126857761..126861849, complement)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) X AC_000187.1 (134101039..134105127, complement)

Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene synapse associated protein 1 Neighboring gene CTP synthase 2 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene dual specificity protein phosphatase 18-like

Genomic regions, transcripts, and products

Bibliography

Pathways from BioSystems

  • Mineral absorption, organism-specific biosystem (from KEGG)
    Mineral absorption, organism-specific biosystemMinerals are one of the five fundamental groups of nutrients needed to sustain life. Of the minerals, calcium plays innumerable roles in our bodies, serving as a main component of bone as well as an ...
  • Mineral absorption, conserved biosystem (from KEGG)
    Mineral absorption, conserved biosystemMinerals are one of the five fundamental groups of nutrients needed to sustain life. Of the minerals, calcium plays innumerable roles in our bodies, serving as a main component of bone as well as an ...

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
calcium ion binding IEA
Inferred from Electronic Annotation
more info
 
vitamin D binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
apical plasma membrane IEA
Inferred from Electronic Annotation
more info
 
basolateral plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein S100-G
Names
calbindin 3, (vitamin D-dependent calcium binding protein)
calbindin-D9k
vitamin D-dependent calcium-binding protein, intestinal

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174257.3NP_776682.1  protein S100-G

    See identical proteins and their annotated locations for NP_776682.1

    Status: PROVISIONAL

    Source sequence(s)
    BC118480
    UniProtKB/Swiss-Prot
    P02633
    Related
    ENSBTAP00000022630.3, ENSBTAT00000022630.4
    Conserved Domains (2) summary
    pfam13499
    Location:5071
    EF-hand_7; EF-hand domain pair
    cl08302
    Location:1379
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037357.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    126857761..126861849 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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