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Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 [ Mus musculus (house mouse) ]

Gene ID: 28169, updated on 16-Oct-2021

Summary

Official Symbol
Agpat3provided by MGI
Official Full Name
1-acylglycerol-3-phosphate O-acyltransferase 3provided by MGI
Primary source
MGI:MGI:1336186
See related
Ensembl:ENSMUSG00000001211
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
lpaat3; AW061257; AW493985; D10Jhu12e
Expression
Ubiquitous expression in testis adult (RPKM 65.3), adrenal adult (RPKM 53.5) and 26 other tissues See more
Orthologs
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Genomic context

See Agpat3 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
19
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (78105008..78188323, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (78269174..78352497, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (77734308..77814445, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene trafficking protein particle complex 10 Neighboring gene predicted gene, 30122 Neighboring gene microRNA 7659 Neighboring gene predicted gene, 40709 Neighboring gene LSM7 homolog, U6 small nuclear RNA associated pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables 1-acylglycerol-3-phosphate O-acyltransferase activity ISO
Inferred from Sequence Orthology
more info
 
enables acyltransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables lysophosphatidic acid acyltransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within phospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in endomembrane system IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
is_active_in endoplasmic reticulum IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in endoplasmic reticulum membrane ISO
Inferred from Sequence Orthology
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in nuclear envelope ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase gamma
Names
1-AGP acyltransferase 3
1-AGPAT 3
LPAAT-gamma
lysophosphatidic acid acyltransferase 3
lysophosphatidic acid acyltransferase gamma
NP_443747.2
XP_006513779.1
XP_006513780.1
XP_006513781.1
XP_006513782.1
XP_006513783.1
XP_006513784.1
XP_006513785.1
XP_006513786.1
XP_030100970.1
XP_036011691.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_053014.3NP_443747.2  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma

    See identical proteins and their annotated locations for NP_443747.2

    Status: PROVISIONAL

    Source sequence(s)
    AC160405, AC160411
    Consensus CDS
    CCDS23963.1
    UniProtKB/Swiss-Prot
    Q9D517
    Related
    ENSMUSP00000132954.2, ENSMUST00000166360.8
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    78105008..78188323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006513717.4XP_006513780.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513780.1

    UniProtKB/Swiss-Prot
    Q9D517
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  2. XM_006513718.1XP_006513781.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513781.1

    UniProtKB/Swiss-Prot
    Q9D517
    Related
    ENSMUSP00000101029.2, ENSMUST00000105390.8
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  3. XM_036155798.1XP_036011691.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  4. XM_006513721.1XP_006513784.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513784.1

    UniProtKB/Swiss-Prot
    Q9D517
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  5. XM_006513723.5XP_006513786.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513786.1

    UniProtKB/Swiss-Prot
    Q9D517
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  6. XM_030245110.2XP_030100970.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  7. XM_006513720.3XP_006513783.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513783.1

    UniProtKB/Swiss-Prot
    Q9D517
    Related
    ENSMUSP00000101028.2, ENSMUST00000105389.8
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  8. XM_006513722.4XP_006513785.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513785.1

    UniProtKB/Swiss-Prot
    Q9D517
    Related
    ENSMUSP00000101026.2, ENSMUST00000105387.8
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  9. XM_006513719.4XP_006513782.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513782.1

    UniProtKB/Swiss-Prot
    Q9D517
    Related
    ENSMUSP00000001240.6, ENSMUST00000001240.12
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
  10. XM_006513716.4XP_006513779.1  1-acyl-sn-glycerol-3-phosphate acyltransferase gamma isoform X1

    See identical proteins and their annotated locations for XP_006513779.1

    UniProtKB/Swiss-Prot
    Q9D517
    Conserved Domains (1) summary
    PLN02380
    Location:12325
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
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