U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATP6V1H ATPase H+ transporting V1 subunit H [ Bos taurus (cattle) ]

Gene ID: 282657, updated on 4-Apr-2024

Summary

Go to the top of the page Help
Official Symbol
ATP6V1Hprovided by VGNC
Official Full Name
ATPase H+ transporting V1 subunit Hprovided by VGNC
Primary source
VGNC:VGNC:26326
See related
Ensembl:ENSBTAG00000003450
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
SFD
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ATP6V1H in Genome Data Viewer
Location:
chromosome: 14
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (21853767..21927759, complement)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene neuropeptides B and W receptor 1 Neighboring gene opioid receptor kappa 1 Neighboring gene regulator of G protein signaling 20 Neighboring gene transcription elongation factor A1 Neighboring gene lysophospholipase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular characterization of the 50- and 57-kDa subunits of the bovine vacuolar proton pump. Zhou Z, et al. J Biol Chem, 1998 Mar 6. PMID 9488725
  2. Cryo-EM structures of intact V-ATPase from bovine brain. Wang R, et al. Nat Commun, 2020 Aug 6. PMID 32764564, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Clone Names

  • MGC128141

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
V-type proton ATPase subunit H
Names
ATPase, H+ transporting, lysosomal, V1 subunit H
V-ATPase 50/57 kDa subunits
V-ATPase subunit H
vacuolar proton pump subunit H
vacuolar proton pump subunit SFD
NP_777129.2
XP_005215462.1
XP_015329916.1
XP_015329917.1
XP_015329918.1
XP_024857184.1
XP_059749113.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_174704.3 → NP_777129.2  V-type proton ATPase subunit H

    See identical proteins and their annotated locations for NP_777129.2

    Status: PROVISIONAL

    Source sequence(s)
    BC103432
    UniProtKB/TrEMBL
    F1MZL8
    Related
    ENSBTAP00000004482.2, ENSBTAT00000004482.4
    Conserved Domains (1) summary
    cd00256
    Location:17 → 447
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    21853767..21927759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015474432.3 → XP_015329918.1  V-type proton ATPase subunit H isoform X3

    UniProtKB/Swiss-Prot
    A0A3Q1M3I3, F1MZL6, O46562, O46563, Q3ZBD5
    UniProtKB/TrEMBL
    F1MZL8
    Conserved Domains (1) summary
    cd00256
    Location:17 → 465
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...

  2. XM_015474431.2 → XP_015329917.1  V-type proton ATPase subunit H isoform X2

    Conserved Domains (1) summary
    cd00256
    Location:169 → 553
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...

  3. XM_015474430.2 → XP_015329916.1  V-type proton ATPase subunit H isoform X1

    Conserved Domains (1) summary
    cd00256
    Location:169 → 571
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...

  4. XM_025001416.2 → XP_024857184.1  V-type proton ATPase subunit H isoform X3

    UniProtKB/Swiss-Prot
    A0A3Q1M3I3, F1MZL6, O46562, O46563, Q3ZBD5
    UniProtKB/TrEMBL
    F1MZL8
    Related
    ENSBTAP00000090049.1, ENSBTAT00000115642.1
    Conserved Domains (1) summary
    cd00256
    Location:17 → 465
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...

  5. XM_005215405.5 → XP_005215462.1  V-type proton ATPase subunit H isoform X3

    See identical proteins and their annotated locations for XP_005215462.1

    UniProtKB/Swiss-Prot
    A0A3Q1M3I3, F1MZL6, O46562, O46563, Q3ZBD5
    UniProtKB/TrEMBL
    F1MZL8
    Conserved Domains (1) summary
    cd00256
    Location:17 → 465
    VATPase_H; VATPase_H, regulatory vacuolar ATP synthase subunit H (Vma13p); activation component of the peripheral V1 complex of V-ATPase, a heteromultimeric enzyme which uses ATP to actively transport protons into organelles and extracellular compartments. The ...

  6. XM_059893130.1 → XP_059749113.1  V-type proton ATPase subunit H isoform X4

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O46563.3 GenPept UniProtKB/Swiss-Prot:O46563

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous