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Gatd3a glutamine amidotransferase like class 1 domain containing 3A [ Mus musculus (house mouse) ]

Gene ID: 28295, updated on 23-Jun-2021

Summary

Official Symbol
Gatd3aprovided by MGI
Official Full Name
glutamine amidotransferase like class 1 domain containing 3Aprovided by MGI
Primary source
MGI:MGI:1351861
See related
Ensembl:ENSMUSG00000053329
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
ES1; C21orf33; D10Jhu81e
Expression
Ubiquitous expression in adrenal adult (RPKM 190.1), heart adult (RPKM 107.5) and 27 other tissues See more
Orthologs
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Genomic context

See Gatd3a in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
7
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (77997900..78005589, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (78162066..78169755, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 10 NC_000076.5 (77624812..77632513, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 51775 Neighboring gene icos ligand Neighboring gene predicted gene, 47922 Neighboring gene PWP2 periodic tryptophan protein homolog (yeast) Neighboring gene trafficking protein particle complex 10

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial
Names
ES1 protein homolog, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001364646.1NP_001351575.1  glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial isoform 2 precursor

    Status: VALIDATED

    Source sequence(s)
    AC164573
    Related
    ENSMUSP00000151605.2, ENSMUST00000219120.2
    Conserved Domains (1) summary
    cl00020
    Location:43233
    GAT_1; Type 1 glutamine amidotransferase (GATase1)-like domain
  2. NM_138601.3NP_613067.1  glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial isoform 1 precursor

    See identical proteins and their annotated locations for NP_613067.1

    Status: VALIDATED

    Source sequence(s)
    AI852165, AK003866
    Consensus CDS
    CCDS35957.1
    UniProtKB/Swiss-Prot
    Q9D172
    Related
    ENSMUSP00000001242.8, ENSMUST00000001242.9
    Conserved Domains (1) summary
    cd03133
    Location:43264
    GATase1_ES1; Type 1 glutamine amidotransferase (GATase1)-like domain found in zebrafish ES1

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    77997900..78005589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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