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LINC00567 long intergenic non-protein coding RNA 567 [ Homo sapiens (human) ]

Gene ID: 283486, updated on 10-Oct-2023

Summary

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Official Symbol
LINC00567provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 567provided by HGNC
Primary source
HGNC:HGNC:43711
See related
Ensembl:ENSG00000259831 AllianceGenome:HGNC:43711
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q34
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (110809676..110813084, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (110039872..110043275, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (111462023..111465431, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein L21 pseudogene 107 Neighboring gene uncharacterized LOC107984613 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:111445577-111446077 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:111446189-111447086 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:111450737-111451238 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:111464033-111464574 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:111464575-111465116 Neighboring gene uncharacterized LOC105370362 Neighboring gene NANOG hESC enhancer GRCh37_chr13:111468190-111468713 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5518 Neighboring gene uncharacterized LOC105370363

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See variants in ClinVar

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

Genotypes

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135280.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL157875
    Related
    ENST00000569854.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    110809676..110813084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    110039872..110043275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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