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BGV89_gp7 L1 [ Sparus aurata papillomavirus 1 ]

Gene ID: 28619805, updated on 17-Aug-2018

Summary

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Gene symbol
BGV89_gp7
Gene description
L1
Locus tag
BGV89_gp7
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Sparus aurata papillomavirus 1 (isolate: SA9pv, nat-host: Sparus aurata)
Lineage
Viruses; dsDNA viruses, no RNA stage; Papillomaviridae; unclassified Papillomaviridae
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Genomic context

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Sequence:
NC_030839.1 (3942..5699)

NC_030839.1Genomic Context describing neighboring genes Neighboring gene E1 Neighboring gene E2 Neighboring gene sORF3 Neighboring gene L2 Neighboring gene hypothetical protein L1a Neighboring gene hypothetical protein L1b

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_030839.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Concurrence of Iridovirus, Polyomavirus, and a Unique Member of a New Group of Fish Papillomaviruses in Lymphocystis Disease-Affected Gilthead Sea Bream. López-Bueno A, et al. J Virol, 2016 Oct 1. PMID 27440877, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 4007-4033 di-cysteine motif
  • Loc: 4010-4030 furin cleavage site
  • Loc: 4496-4501 splice donor
  • Loc: 4553-4567 splice acceptor

regulatory

  • Loc: 5139-5144 regulatory_class = polyA_signal_sequence

General protein information

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Preferred Names
L1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_030839.1 Reference assembly

    Range
    3942..5699
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009272704.1 L1 [Sparus aurata papillomavirus 1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1B2RW85
Nucleotide Protein
Heading Accession and Version

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