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Fam184b family with sequence similarity 184, member B [ Rattus norvegicus (Norway rat) ]

Gene ID: 289671, updated on 30-Mar-2024

Summary

Official Symbol
Fam184bprovided by RGD
Official Full Name
family with sequence similarity 184, member Bprovided by RGD
Primary source
RGD:1564950
See related
Ensembl:ENSRNOG00000003704 AllianceGenome:RGD:1564950
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1564950
Summary
Orthologous to human FAM184B (family with sequence similarity 184 member B). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Brain (RPKM 20.6), Muscle (RPKM 14.6) and 3 other tissues See more
Orthologs
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Genomic context

Location:
14q11
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (69688031..69803922)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (65475489..65591388)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (69970034..70086018)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene heat shock protein 90 alpha family class B member 1, pseudogene 5 Neighboring gene uncharacterized LOC120096619 Neighboring gene DDB1 and CUL4 associated factor 16 Neighboring gene uncharacterized LOC134481758 Neighboring gene mediator complex subunit 28 Neighboring gene leucine aminopeptidase 3

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001305171.1NP_001292100.1  protein FAM184B

    Status: PROVISIONAL

    Source sequence(s)
    JAXUCZ010000014
    UniProtKB/TrEMBL
    D3ZTZ0
    Related
    ENSRNOP00000004923.6, ENSRNOT00000004923.6
    Conserved Domains (2) summary
    COG1196
    Location:97819
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam15665
    Location:50241
    FAM184; Family with sequence similarity 184, A and B

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    69688031..69803922
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)