U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BPyV_gp4 major capsid protein VP1 [ Bos taurus polyomavirus 1 ]

Gene ID: 29031005, updated on 18-Aug-2023

Summary

Go to the top of the page Help
Gene symbol
BPyV_gp4
Gene description
major capsid protein VP1
Locus tag
BPyV_gp4
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus polyomavirus 1
Lineage
Viruses; dsDNA viruses, no RNA stage; Polyomaviridae; unassigned Polyomaviridae
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_001442.1 (1540..2637)

NC_001442.1Genomic Context describing neighboring genes Neighboring gene agnoprotein Neighboring gene VP2 Neighboring gene VP3 Neighboring gene large T antigen Neighboring gene small t antigen

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_001442.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. The complete nucleotide sequence of bovine polyomavirus. Schuurman R, et al. J Gen Virol, 1990 Aug. PMID 2167926
  2. Analysis of splice sites in the early region of bovine polyomavirus: evidence for a unique pattern of large T mRNA splicing. Schuurman R, et al. J Gen Virol, 1992 Nov. PMID 1279101

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
major capsid protein VP1
NP_040787.1
  • VP1; major capsid protein of polyomavirus; 72 pentamers of VP1 comprise the outer capsid and form a T = 7 icosahedral lattice; VP1 contains an amino-terminal bipartite nuclear targeting signal that overlaps its DNA-binding-domain; The polyomaviruses are non-enveloped dsDNA viruses with a major capsid protein, VP1, that facilitates binding of genomic DNA and entry into target cells; the viral genome is organized into two divergent transcriptional units known as early and late regions; mRNAs from the early region encode the viral small and large t-antigens; mRNAs from the late region encode the structural proteins, VP1, VP2 and VP3

VOG classification

Description:

  • VOGd0171 [S] Capsid protein VP1
  • Structural Proteins

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001442.1 Reference assembly

    Range
    1540..2637
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_040787.1 major capsid protein VP1 [Bos taurus polyomavirus 1]

    See identical proteins and their annotated locations for NP_040787.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P24848
    UniProtKB/TrEMBL
    A0A0S2SW53, A0A0U4AJ71, A0A8E5F660
    Conserved Domains (1) summary
    PHA02614
    Location:1 → 364
    PHA02614; Major capsid protein VP1; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P24848.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases