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Prcp prolylcarboxypeptidase [ Rattus norvegicus (Norway rat) ]

Gene ID: 293118, updated on 4-Apr-2024

Summary

Official Symbol
Prcpprovided by RGD
Official Full Name
prolylcarboxypeptidaseprovided by RGD
Primary source
RGD:1307842
See related
Ensembl:ENSRNOG00000010630 AllianceGenome:RGD:1307842
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Summary
Predicted to enable dipeptidyl-peptidase activity. Predicted to be involved in several processes, including angiogenesis involved in wound healing; negative regulation of systemic arterial blood pressure; and regulation of blood vessel endothelial cell migration. Predicted to act upstream of or within several processes, including energy homeostasis; plasma kallikrein-kinin cascade; and regulation of thyroid hormone mediated signaling pathway. Predicted to be located in basal part of cell and lysosome. Orthologous to human PRCP (prolylcarboxypeptidase). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Spleen (RPKM 205.9), Adrenal (RPKM 156.5) and 9 other tissues See more
Orthologs
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Genomic context

See Prcp in Genome Data Viewer
Location:
1q32
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (156343894..156396295)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (146931487..146983891)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (157701089..157750177)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene RAB30, member RAS oncogene family Neighboring gene small nucleolar RNA SNORA70 Neighboring gene DNA damage-induced apoptosis suppressor Neighboring gene uncharacterized LOC134485151 Neighboring gene centrosomal protein 20, pseudogene 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables dipeptidyl-peptidase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables serine-type exopeptidase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in basal part of cell ISO
Inferred from Sequence Orthology
more info
 
located_in intracellular membrane-bounded organelle ISO
Inferred from Sequence Orthology
more info
 
located_in lysosome ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
lysosomal Pro-X carboxypeptidase
Names
prolylcarboxypeptidase (angiotensinase C)
NP_001099751.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106281.4NP_001099751.2  lysosomal Pro-X carboxypeptidase precursor

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000001
    UniProtKB/TrEMBL
    A0A8I6AN30, D4AA31
    Related
    ENSRNOP00000014271.4, ENSRNOT00000014271.7
    Conserved Domains (2) summary
    COG0596
    Location:101211
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    cl21494
    Location:52471
    Abhydrolase; alpha/beta hydrolases

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    156343894..156396295
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)