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Capza3 capping actin protein of muscle Z-line subunit alpha 3 [ Rattus norvegicus (Norway rat) ]

Gene ID: 29324, updated on 5-Sep-2021

Summary

Official Symbol
Capza3provided by RGD
Official Full Name
capping actin protein of muscle Z-line subunit alpha 3provided by RGD
Primary source
RGD:2271
See related
Ensembl:ENSRNOG00000008727
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Cappa3
Summary
putative actin capping protein that may be involved in sperm head formation [RGD, Feb 2006]
Orthologs
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Genomic context

See Capza3 in Genome Data Viewer
Location:
4q44
Exon count:
1
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 4 NC_051339.1 (172929273..172930486)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 4 NC_005103.4 (174181644..174182857)

Chromosome 4 - NC_051339.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120102423 Neighboring gene phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 gamma Neighboring gene phospholipase C, zeta 1 Neighboring gene uncharacterized LOC108350783 Neighboring gene pleckstrin homology domain containing A5 Neighboring gene uncharacterized LOC120102424

Genomic regions, transcripts, and products

General gene information

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 
enables actin filament binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in actin cytoskeleton organization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in actin filament organization ISO
Inferred from Sequence Orthology
more info
 
involved_in barbed-end actin filament capping IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in barbed-end actin filament capping IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within cytoplasm organization ISO
Inferred from Sequence Orthology
more info
 
involved_in spermatid development IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within spermatid development ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
part_of F-actin capping protein complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of F-actin capping protein complex IEA
Inferred from Electronic Annotation
more info
 
located_in acrosomal vesicle IDA
Inferred from Direct Assay
more info
PubMed 
located_in cortical cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in cortical cytoskeleton ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm IDA
Inferred from Direct Assay
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane ISO
Inferred from Sequence Orthology
more info
 
located_in sperm head ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
F-actin-capping protein subunit alpha-3
Names
capZ alpha-3
capping actin protein of muscle Z-line alpha subunit 3
capping protein (actin filament) muscle Z-line, alpha 3
capping protein alpha 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_017164.2NP_058860.2  F-actin-capping protein subunit alpha-3

    See identical proteins and their annotated locations for NP_058860.2

    Status: VALIDATED

    Source sequence(s)
    BC078870
    UniProtKB/TrEMBL
    Q6AYW7
    Related
    ENSRNOP00000011555.3, ENSRNOT00000011555.4
    Conserved Domains (1) summary
    pfam01267
    Location:15274
    F-actin_cap_A; F-actin capping protein alpha subunit

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051339.1 Reference mRatBN7.2 Primary Assembly

    Range
    172929273..172930486
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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