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Ms4a10 membrane spanning 4-domains A10 [ Rattus norvegicus (Norway rat) ]

Gene ID: 293739, updated on 25-Nov-2021

Summary

Official Symbol
Ms4a10provided by RGD
Official Full Name
membrane spanning 4-domains A10provided by RGD
Primary source
RGD:1307478
See related
EnsemblRapid:ENSRNOG00000020932
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Adrenal (RPKM 1.7), Uterus (RPKM 1.5) and 1 other tissue See more
Orthologs
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Genomic context

See Ms4a10 in Genome Data Viewer
Location:
1q43
Exon count:
8
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (207611312..207624452, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (227016795..227030220, complement)

Chromosome 1 - NC_051336.1Genomic Context describing neighboring genes Neighboring gene prostaglandin D2 receptor 2 Neighboring gene coiled-coil domain containing 86 Neighboring gene membrane spanning 4-domains A15 Neighboring gene membrane spanning 4-domains A18

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Homology

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
membrane-spanning 4-domains subfamily A member 10
Names
membrane-spanning 4-domains, subfamily A, member 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106336.1NP_001099806.1  membrane-spanning 4-domains subfamily A member 10

    See identical proteins and their annotated locations for NP_001099806.1

    Status: PROVISIONAL

    Source sequence(s)
    CH473953
    UniProtKB/TrEMBL
    D4A504
    Related
    ENSRNOP00000028410.4, ENSRNOT00000028410.5
    Conserved Domains (1) summary
    pfam04103
    Location:57190
    CD20; CD20-like family

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051336.1 Reference mRatBN7.2 Primary Assembly

    Range
    207611312..207624452 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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