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Sult4a1 sulfotransferase family 4A, member 1 [ Mus musculus (house mouse) ]

Gene ID: 29859, updated on 8-Jul-2021

Summary

Official Symbol
Sult4a1provided by MGI
Official Full Name
sulfotransferase family 4A, member 1provided by MGI
Primary source
MGI:MGI:1888971
See related
Ensembl:ENSMUSG00000018865
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
NST; Sult; BR-ST; ST4A1; BR-STL; Sultx3; mBR-STL; AI853543; BR-STL-1; 2400007A17Rik
Expression
Biased expression in cortex adult (RPKM 100.2), cerebellum adult (RPKM 83.3) and 4 other tissues See more
Orthologs
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Genomic context

See Sult4a1 in Genome Data Viewer
Location:
15; 15 E2
Exon count:
8
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (83960298..83989955, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (84076097..84105754, complement)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 15 NC_000081.5 (83906527..83936184, complement)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 41372 Neighboring gene EF-hand calcium binding domain 6 Neighboring gene ribosomal protein L31, pseudogene 22 Neighboring gene predicted gene, 46526 Neighboring gene patatin-like phospholipase domain containing 5 Neighboring gene predicted gene, 33432

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables sulfotransferase activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables sulfotransferase activity IDA
Inferred from Direct Assay
more info
PubMed 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within steroid metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in sulfation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within sulfur compound metabolic process IDA
Inferred from Direct Assay
more info
PubMed 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in cytoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in cytoplasm TAS
Traceable Author Statement
more info
PubMed 
located_in cytosol IDA
Inferred from Direct Assay
more info
PubMed 
located_in mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
sulfotransferase 4A1
Names
brain sulfotransferase-like protein
nervous system sulfotransferase
sulfotransferase-related protein
NP_001343444.1
NP_038901.3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001356515.1NP_001343444.1  sulfotransferase 4A1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL603867
    Consensus CDS
    CCDS88819.1
    Related
    ENSMUSP00000155695.2, ENSMUST00000229826.2
    Conserved Domains (1) summary
    pfam00685
    Location:45230
    Sulfotransfer_1; Sulfotransferase domain
  2. NM_013873.3NP_038901.3  sulfotransferase 4A1 isoform 1

    See identical proteins and their annotated locations for NP_038901.3

    Status: VALIDATED

    Source sequence(s)
    BC054757
    Consensus CDS
    CCDS27708.1
    UniProtKB/Swiss-Prot
    P63046
    Related
    ENSMUSP00000080973.6, ENSMUST00000082365.6
    Conserved Domains (1) summary
    pfam00685
    Location:45277
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    83960298..83989955 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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