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Ppp1r36 protein phosphatase 1, regulatory subunit 36 [ Rattus norvegicus (Norway rat) ]

Gene ID: 299153, updated on 5-Mar-2024

Summary

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Official Symbol
Ppp1r36provided by RGD
Official Full Name
protein phosphatase 1, regulatory subunit 36provided by RGD
Primary source
RGD:1309051
See related
Ensembl:ENSRNOG00000038480 AllianceGenome:RGD:1309051
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1309051
Summary
Predicted to enable phosphatase binding activity and protein phosphatase inhibitor activity. Predicted to be involved in negative regulation of phosphatase activity. Orthologous to human PPP1R36 (protein phosphatase 1 regulatory subunit 36). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Testes (RPKM 201.8), Kidney (RPKM 100.0) and 8 other tissues See more
Orthologs
human mouse all
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Genomic context

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See Ppp1r36 in Genome Data Viewer
Location:
6q24
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 6 NC_086024.1 (100874397..100894764)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (95138526..95159102)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (99443753..99464143)

Chromosome 6 - NC_086024.1Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 1 Neighboring gene uncharacterized LOC120103556 Neighboring gene heat shock protein family A (Hsp70) member 2 Neighboring gene uncharacterized LOC102556012 Neighboring gene ribosomal protein S17 like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. Docking motif-guided mapping of the interactome of protein phosphatase-1. Hendrickx A, et al. Chem Biol, 2009 Apr 24. PMID 19389623
  2. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). Gerhard DS, et al. Genome Res, 2004 Oct. PMID 15489334, Free PMC Article
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables phosphatase binding IEA
Inferred from Electronic Annotation
more info
  
enables protein phosphatase inhibitor activity IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 36
Names
uncharacterized protein C14orf50 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001013944.1 → NP_001013966.1  protein phosphatase 1 regulatory subunit 36

    See identical proteins and their annotated locations for NP_001013966.1

    Status: PROVISIONAL

    Source sequence(s)
    BC079166
    UniProtKB/Swiss-Prot
    Q68FW6
    UniProtKB/TrEMBL
    A0A8I6GEJ5
    Related
    ENSRNOP00000055437.3, ENSRNOT00000058642.5
    Conserved Domains (1) summary
    pfam14895
    Location:67 → 400
    PPPI_inhib; Protein phosphatase 1 inhibitor

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086024.1 Reference GRCr8

    Range
    100874397..100894764
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017594094.3 → XP_017449583.1  protein phosphatase 1 regulatory subunit 36 isoform X2

    UniProtKB/TrEMBL
    A0A8I6GIY3, A6HCA8
    Related
    ENSRNOP00000091380.1

  2. XM_039112012.2 → XP_038967940.1  protein phosphatase 1 regulatory subunit 36 isoform X1

    Conserved Domains (1) summary
    pfam14895
    Location:98 → 431
    PPPI_inhib; Protein phosphatase 1 inhibitor

  3. XM_039112013.2 → XP_038967941.1  protein phosphatase 1 regulatory subunit 36 isoform X4

    UniProtKB/TrEMBL
    A6HCA8
    Conserved Domains (1) summary
    pfam14895
    Location:7 → 335
    PPPI_inhib; Protein phosphatase 1 inhibitor

  4. XM_006240231.3 → XP_006240293.1  protein phosphatase 1 regulatory subunit 36 isoform X3

    UniProtKB/TrEMBL
    A0A8I6GEJ5
    Conserved Domains (1) summary
    pfam14895
    Location:31 → 364
    PPPI_inhib; Protein phosphatase 1 inhibitor
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q68FW6.1 GenPept UniProtKB/Swiss-Prot:Q68FW6

Gene LinkOut

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