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Fbrsl1 fibrosin-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 304572, updated on 3-Apr-2024

Summary

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Official Symbol
Fbrsl1provided by RGD
Official Full Name
fibrosin-like 1provided by RGD
Primary source
RGD:1563342
See related
Ensembl:ENSRNOG00000030721 AllianceGenome:RGD:1563342
Gene type
protein coding
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1563342
Summary
Orthologous to human FBRSL1 (fibrosin like 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in Adrenal (RPKM 39.1), Kidney (RPKM 29.9) and 9 other tissues See more
Orthologs
human mouse all
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Genomic context

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Location:
12q16
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 12 NC_086030.1 (51891211..51979715)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 12 NC_051347.1 (46231466..46320607)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 12 NC_005111.4 (52289979..52378726)

Chromosome 12 - NC_086030.1Genomic Context describing neighboring genes Neighboring gene polypeptide N-acetylgalactosaminyltransferase 9 Neighboring gene uncharacterized LOC134481339 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene leucine rich colipase-like 1 Neighboring gene purinergic receptor P2X 2 Neighboring gene DNA polymerase epsilon, catalytic subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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Related articles in PubMed

  1. The mRNA-bound proteome and its global occupancy profile on protein-coding transcripts. Baltz AG, et al. Mol Cell, 2012 Jun 8. PMID 22681889

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
fibrosin-1-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086030.1 Reference GRCr8

    Range
    51891211..51979715
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017598567.3 → XP_017454056.1  fibrosin-1-like protein isoform X11

    UniProtKB/TrEMBL
    A0A8I6A5A6
    Related
    ENSRNOP00000086163.1

  2. XM_017598560.3 → XP_017454049.1  fibrosin-1-like protein isoform X2

    UniProtKB/TrEMBL
    D3Z858

  3. XM_006249591.5 → XP_006249653.1  fibrosin-1-like protein isoform X8

    UniProtKB/TrEMBL
    A0A8I6A2S4
    Related
    ENSRNOP00000085646.1
    Conserved Domains (1) summary
    pfam15336
    Location:523 → 726
    Auts2; Autism susceptibility gene 2 protein

  4. XM_222254.11 → XP_222254.5  fibrosin-1-like protein isoform X1

    UniProtKB/TrEMBL
    D3Z858, F1M3A0
    Related
    ENSRNOP00000049044.6
    Conserved Domains (1) summary
    pfam15336
    Location:568 → 771
    Auts2; Autism susceptibility gene 2 protein

  5. XM_017598563.3 → XP_017454052.1  fibrosin-1-like protein isoform X5

    UniProtKB/TrEMBL
    D3Z858

  6. XM_006249592.5 → XP_006249654.1  fibrosin-1-like protein isoform X9

    UniProtKB/TrEMBL
    D3Z858
    Related
    ENSRNOP00000062688.3
    Conserved Domains (1) summary
    pfam15336
    Location:545 → 724
    Auts2; Autism susceptibility gene 2 protein

  7. XM_063271804.1 → XP_063127874.1  fibrosin-1-like protein isoform X7

  8. XM_006249589.5 → XP_006249651.1  fibrosin-1-like protein isoform X4

    UniProtKB/TrEMBL
    D3Z858
    Related
    ENSRNOP00000066472.2
    Conserved Domains (1) summary
    pfam15336
    Location:545 → 748
    Auts2; Autism susceptibility gene 2 protein

  9. XM_017598561.3 → XP_017454050.1  fibrosin-1-like protein isoform X3

    UniProtKB/TrEMBL
    D3Z858

  10. XM_063271803.1 → XP_063127873.1  fibrosin-1-like protein isoform X6

    UniProtKB/TrEMBL
    M0RAC7

  11. XM_063271805.1 → XP_063127875.1  fibrosin-1-like protein isoform X10

Nucleotide Protein Strain
Heading Accession and Version

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