Format

Send to:

Choose Destination

Zfp367 zinc finger protein 367 [ Rattus norvegicus (Norway rat) ]

Gene ID: 306695, updated on 6-May-2021

Summary

Official Symbol
Zfp367provided by RGD
Official Full Name
zinc finger protein 367provided by RGD
Primary source
RGD:1307136
See related
Ensembl:ENSRNOG00000027234
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Znf367
Expression
Biased expression in Thymus (RPKM 101.5), Spleen (RPKM 83.4) and 9 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See Zfp367 in Genome Data Viewer
Location:
17p14
Exon count:
6
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 17 NC_051352.1 (965161..984290)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (1652892..1672021, complement)

Chromosome 17 - NC_051352.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 14B Neighboring gene U4 spliceosomal RNA Neighboring gene hyaluronan binding protein 4 Neighboring gene solute carrier family 35 member D2 Neighboring gene hydroxysteroid (17-beta) dehydrogenase 3

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001012051.1NP_001012051.1  zinc finger protein 367

    See identical proteins and their annotated locations for NP_001012051.1

    Status: PROVISIONAL

    Source sequence(s)
    BC085804
    UniProtKB/Swiss-Prot
    Q5U2Z0
    Related
    ENSRNOP00000030325.4, ENSRNOT00000036287.4
    Conserved Domains (4) summary
    COG5048
    Location:157230
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:159179
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:158179
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:171198
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051352.1 Reference mRatBN7.2 Primary Assembly

    Range
    965161..984290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039095608.1XP_038951536.1  zinc finger protein 367 isoform X1

    Conserved Domains (2) summary
    COG5048
    Location:48121
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:5070
    ZF_C2H2; C2H2 Zn finger [structural motif]
Support Center