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Apln apelin [ Mus musculus (house mouse) ]

Gene ID: 30878, updated on 21-Apr-2024

Summary

Official Symbol
Aplnprovided by MGI
Official Full Name
apelinprovided by MGI
Primary source
MGI:MGI:1353624
See related
Ensembl:ENSMUSG00000037010 AllianceGenome:MGI:1353624
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Apel; 6030430G11Rik
Summary
This gene encodes the neuropeptide Apelin, an endogenous ligand of the G protein-coupled receptor APJ. This gene is highly expressed in the central nervous system and peripheral tissues and the encoded preproprotein undergoes proteolytic processing to generate mature peptides of different sizes that are secreted into the plasma. These peptides play important roles in a broad range of physiological processes such as cardiac contractility, blood pressure, blood vessel growth, appetite and drink behavior, and pituitary hormone secretion. Mice lacking the encoded protein develop progressive heart failure and exhibit a shorter bleeding time, prothrombotic profile and increased bone mass. [provided by RefSeq, Jul 2016]
Expression
Broad expression in lung adult (RPKM 12.2), cortex adult (RPKM 7.1) and 19 other tissues See more
Orthologs
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Genomic context

Location:
X A4; X 25.48 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (47114023..47123730, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (48025146..48034853, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 36658 Neighboring gene calmodulin 2 pseudogene Neighboring gene STARR-seq mESC enhancer starr_47100 Neighboring gene STARR-seq mESC enhancer starr_47102 Neighboring gene X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound Neighboring gene CapStarr-seq enhancer MGSCv37_chrX:45490128-45490351 Neighboring gene CapStarr-seq enhancer MGSCv37_chrX:45494812-45494921 Neighboring gene SAM and SH3 domain containing 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (10)  1 citation
  • Endonuclease-mediated (4) 

Pathways from PubChem

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables apelin receptor binding ISO
Inferred from Sequence Orthology
more info
 
enables hormone activity ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding ISO
Inferred from Sequence Orthology
more info
 
enables signaling receptor binding ISO
Inferred from Sequence Orthology
more info
PubMed 
Process Evidence Code Pubs
acts_upstream_of_or_within G protein-coupled receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within angiogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in apelin receptor signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
involved_in apelin receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in coronary vasculature development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in drinking behavior ISO
Inferred from Sequence Orthology
more info
 
involved_in feeding behavior ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within gastrulation IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within multicellular organism development IEA
Inferred from Electronic Annotation
more info
 
involved_in negative regulation of blood pressure ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of gene expression ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of systemic arterial blood pressure ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of vascular associated smooth muscle cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of vasoconstriction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of G protein-coupled receptor internalization IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of G protein-coupled receptor internalization ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of cell population proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of corticotropin secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of corticotropin-releasing hormone secretion ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of heart contraction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of heart rate ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of heat generation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of miRNA transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phosphorylation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of vascular endothelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of body fluid levels ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of the force of heart contraction ISO
Inferred from Sequence Orthology
more info
 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extracellular region ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 
located_in perinuclear region of cytoplasm ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
apelin
Names
APJ endogenous ligand
preproapelin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013912.4NP_038940.1  apelin preproprotein

    See identical proteins and their annotated locations for NP_038940.1

    Status: REVIEWED

    Source sequence(s)
    AL672274, DQ832282
    Consensus CDS
    CCDS40958.1
    UniProtKB/Swiss-Prot
    Q9R0R4
    UniProtKB/TrEMBL
    Q544B5
    Related
    ENSMUSP00000046012.8, ENSMUST00000039026.8
    Conserved Domains (1) summary
    pfam15360
    Location:2377
    Apelin; APJ endogenous ligand

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    47114023..47123730 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)