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CG15471 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31412, updated on 10-May-2024

Summary

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Official Symbol
CG15471provided by FlyBase
Primary source
FLYBASE:FBgn0029726
Locus tag
Dmel_CG15471
See related
AllianceGenome:FB:FBgn0029726
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG15471
Orthologs
all
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Genomic context

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See CG15471 in Genome Data Viewer
Location:
4D1-4D1; 1-9 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (4782201..4782789, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (4676234..4676822, complement)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45515 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comprehensive Identification and Alternative Splicing of Microexons in Drosophila. Pang TL, et al. Front Genet, 2021. PMID 33859668, Free PMC Article
  2. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  3. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848
  4. High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression. Batut P, et al. Genome Res, 2013 Jan. PMID 22936248, Free PMC Article
  5. Landscape and evolution of tissue-specific alternative polyadenylation across Drosophila species. Sanfilippo P, et al. Genome Biol, 2017 Nov 30. PMID 29191225, Free PMC Article

See all (18) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
Names
CG15471-PB
CG15471-PC

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    4782201..4782789 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001144684.2 → NP_001138156.1  uncharacterized protein Dmel_CG15471, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001138156.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V5Q5, Q9W4G8
    Conserved Domains (1) summary
    pfam01476
    Location:26 → 69
    LysM; LysM domain

  2. NM_131959.3 → NP_572187.2  uncharacterized protein Dmel_CG15471, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572187.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q4V5Q5, Q9W4G8
    Conserved Domains (1) summary
    pfam01476
    Location:26 → 69
    LysM; LysM domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9W4G8 Q9W4G8

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
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