U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Fum1 Fumarase 1 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 31605, updated on 11-Apr-2024

Summary

Official Symbol
Fum1provided by FlyBase
Official Full Name
Fumarase 1provided by FlyBase
Primary source
FLYBASE:FBgn0286222
Locus tag
Dmel_CG4094
See related
AllianceGenome:FB:FBgn0286222
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG 4094; CG4094; Dmel\CG4094; Fuh; Fum; FUM; l(1)G0255; l(1)G0290
Summary
Predicted to enable fumarate hydratase activity. Predicted to be involved in fumarate metabolic process; malate metabolic process; and tricarboxylic acid cycle. Located in mitochondrion. Is expressed in several structures, including embryonic Malpighian tubule; extended germ band embryo; labral sensory complex; labral sensory complex primordium; and spermatozoon. Human ortholog(s) of this gene implicated in fumarase deficiency and lung non-small cell carcinoma. Orthologous to human FH (fumarate hydratase). [provided by Alliance of Genome Resources, Apr 2022]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Location:
6C5-6C5; 1-18 cM
Exon count:
6
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (6678424..6681845)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (6572457..6575878)

Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Minichromosome maintenance 6 Neighboring gene NADH dehydrogenase (ubiquinone) ASHI subunit Neighboring gene Fumarase 2 Neighboring gene PTEN-induced putative kinase 1 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables catalytic activity IEA
Inferred from Electronic Annotation
more info
 
enables fumarate hydratase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables fumarate hydratase activity IEA
Inferred from Electronic Annotation
more info
 
enables fumarate hydratase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables lyase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in fumarate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in fumarate metabolic process IEA
Inferred from Electronic Annotation
more info
 
involved_in malate metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in tricarboxylic acid cycle IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 
involved_in tricarboxylic acid cycle ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of tricarboxylic acid cycle heteromeric enzyme complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
fumarase 1
Names
CG4094-PA
CG4094-PB
Fum1-PA
Fum1-PB
fumarase
fumarate hydratase
fumerase
l(1)G0255
lethal (1) G0255
NP_572339.1
NP_727108.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004354.4 Reference assembly

    Range
    6678424..6681845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_132111.3NP_572339.1  fumarase 1, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_572339.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8SXM1, Q9W3X6
    Related
    FBpp0070914
    Conserved Domains (1) summary
    PRK00485
    Location:31495
    fumC; fumarate hydratase; Reviewed
  2. NM_167081.3NP_727108.1  fumarase 1, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_727108.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8IRQ5, Q8SXM1
    Related
    FBpp0070915
    Conserved Domains (1) summary
    PRK00485
    Location:3467
    fumC; fumarate hydratase; Reviewed