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Gimap9 GTPase, IMAP family member 9 [ Mus musculus (house mouse) ]

Gene ID: 317758, updated on 3-Apr-2024

Summary

Official Symbol
Gimap9provided by MGI
Official Full Name
GTPase, IMAP family member 9provided by MGI
Primary source
MGI:MGI:3511744
See related
Ensembl:ENSMUSG00000051124 AllianceGenome:MGI:3511744
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
IAN-7; A630002K24
Summary
This gene encodes a protein belonging to the GTP-binding superfamily and to the immuno-associated nucleotide (IAN) subfamily of nucleotide-binding proteins. In humans, the IAN subfamily genes are located in a cluster at 7q36.1. [provided by RefSeq, Jul 2008]
Expression
Broad expression in thymus adult (RPKM 10.8), liver E14 (RPKM 3.9) and 16 other tissues See more
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Genomic context

See Gimap9 in Genome Data Viewer
Location:
6 B2.3; 6 23.65 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (48653084..48656050)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (48676121..48679116)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E9664 Neighboring gene GTPase, IMAP family member 8 Neighboring gene predicted gene, 44262 Neighboring gene predicted gene, 46958 Neighboring gene STARR-positive B cell enhancer ABC_E3653 Neighboring gene GTPase, IMAP family member 4 Neighboring gene GTPase, IMAP family member 6 Neighboring gene STARR-positive B cell enhancer ABC_E8100

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General protein information

Preferred Names
GTPase IMAP family member 9
Names
immune associated nucleotide family member
immune-associated nucleotide-binding protein 7
immunity-associated nucleotide-binding protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001411758.1NP_001398687.1  GTPase IMAP family member 9 isoform 2

    Status: REVIEWED

    Source sequence(s)
    AC153894
    Related
    ENSMUSP00000122830.2, ENSMUST00000147936.2
  2. NM_001411759.1NP_001398688.1  GTPase IMAP family member 9 isoform 3

    Status: REVIEWED

    Source sequence(s)
    AC153894
  3. NM_174960.3NP_777620.1  GTPase IMAP family member 9 isoform 1

    See identical proteins and their annotated locations for NP_777620.1

    Status: REVIEWED

    Source sequence(s)
    AC153894
    Consensus CDS
    CCDS20109.1
    UniProtKB/Swiss-Prot
    G3X987, Q4V9U6, Q8CGH1
    Related
    ENSMUSP00000050330.5, ENSMUST00000054050.5
    Conserved Domains (1) summary
    cd01852
    Location:9207
    AIG1; AvrRpt2-Induced Gene 1 (AIG1)

RNA

  1. NR_177654.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC153894
  2. NR_177655.1 RNA Sequence

    Status: REVIEWED

    Source sequence(s)
    AC153894

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    48653084..48656050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)