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E1 E1 [ Trichechus manatus latirostris papillomavirus 1 ]

Gene ID: 3197251, updated on 31-Jan-2022

Summary

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Gene symbol
E1
Gene description
E1
Locus tag
TMLPV1gp3
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Trichechus manatus latirostris papillomavirus 1 (acronym: TmPV-1, nat-host: Florida manatee (Trichechus manatus latirostris))
Lineage
Viruses; Monodnaviria; Shotokuvirae; Cossaviricota; Papovaviricetes; Zurhausenvirales; Papillomaviridae; Firstpapillomavirinae; Rhopapillomavirus
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Genomic context

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Sequence:
NC_006563.1 (763..2598)

NC_006563.1Genomic Context describing neighboring genes Neighboring gene E6 Neighboring gene E7 Neighboring gene E2 Neighboring gene E4 Neighboring gene minor capsid protein Neighboring gene major capsid protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006563.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of a novel close-to-root papillomavirus from a Florida manatee by using multiply primed rolling-circle amplification: Trichechus manatus latirostris papillomavirus type 1. Rector A, et al. J Virol, 2004 Nov. PMID 15507660, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
E1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006563.1 Reference assembly

    Range
    763..2598
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_164623.1 E1 [Trichechus manatus latirostris papillomavirus 1]

    See identical proteins and their annotated locations for YP_164623.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q5UUY3
    Conserved Domains (1) summary
    PHA02774
    Location:3 → 611
    PHA02774; E1; Provisional
Nucleotide Protein
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Gene LinkOut

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