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Rnf222 ring finger protein 222 [ Mus musculus (house mouse) ]

Gene ID: 320040, updated on 24-Apr-2022

Summary

Official Symbol
Rnf222provided by MGI
Official Full Name
ring finger protein 222provided by MGI
Primary source
MGI:MGI:2443227
See related
Ensembl:ENSMUSG00000046490 AllianceGenome:MGI:2443227
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
9930039A11Rik
Summary
Predicted to enable metal ion binding activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human RNF222 (ring finger protein 222). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See Rnf222 in Genome Data Viewer
Location:
11; 11 B3
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (68772947..68786605)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (68882121..68895779)
Build 37.2 previous assembly MGSCv37 (GCF_000001635.18) 11 NC_000077.5 (68702055..68708517)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene myosin, heavy polypeptide 10, non-muscle Neighboring gene predicted gene, 53684 Neighboring gene predicted gene, 53685 Neighboring gene nudE neurodevelopment protein 1 like 1 Neighboring gene predicted gene, 22608 Neighboring gene ribosomal protein L26

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_177060.3NP_796034.2  RING finger protein 222

    See identical proteins and their annotated locations for NP_796034.2

    Status: VALIDATED

    Source sequence(s)
    AK028294, AK037028
    Consensus CDS
    CCDS24871.1
    UniProtKB/Swiss-Prot
    Q8CEF8
    Related
    ENSMUSP00000067364.5, ENSMUST00000065213.5
    Conserved Domains (1) summary
    cd16564
    Location:1365
    RING-HC_RNF222; RING finger, HC subclass, found in RING finger protein 222 (RNF222) and similar proteins

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    68772947..68786605
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006533540.3XP_006533603.1  RING finger protein 222 isoform X1

    See identical proteins and their annotated locations for XP_006533603.1

    UniProtKB/Swiss-Prot
    Q8CEF8
    Conserved Domains (1) summary
    cd16564
    Location:1365
    RING-HC_RNF222; RING finger, HC subclass, found in RING finger protein 222 (RNF222) and similar proteins
  2. XM_006533542.4XP_006533605.1  RING finger protein 222 isoform X1

    See identical proteins and their annotated locations for XP_006533605.1

    UniProtKB/Swiss-Prot
    Q8CEF8
    Conserved Domains (1) summary
    cd16564
    Location:1365
    RING-HC_RNF222; RING finger, HC subclass, found in RING finger protein 222 (RNF222) and similar proteins
  3. XM_006533543.3XP_006533606.1  RING finger protein 222 isoform X1

    See identical proteins and their annotated locations for XP_006533606.1

    UniProtKB/Swiss-Prot
    Q8CEF8
    Conserved Domains (1) summary
    cd16564
    Location:1365
    RING-HC_RNF222; RING finger, HC subclass, found in RING finger protein 222 (RNF222) and similar proteins