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calm3b calmodulin 3b (phosphorylase kinase, delta) [ Danio rerio (zebrafish) ]

Gene ID: 321808, updated on 27-Mar-2024

Summary

Official Symbol
calm3bprovided by ZNC
Official Full Name
calmodulin 3b (phosphorylase kinase, delta)provided by ZNC
Primary source
ZFIN:ZDB-GENE-030131-527
See related
Ensembl:ENSDARG00000074057 AllianceGenome:ZFIN:ZDB-GENE-030131-527
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:55591; zgc:76987; wu:fb36a09
Summary
Human ortholog(s) of this gene implicated in familial hypertrophic cardiomyopathy. Orthologous to human CALM3 (calmodulin 3). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See calm3b in Genome Data Viewer
Location:
chromosome: 21
Exon count:
6
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 21 NC_007132.7 (26726968..26732088)
105 previous assembly GRCz10 (GCF_000002035.5) 21 NC_007132.6 (26690273..26695393)

Chromosome 21 - NC_007132.7Genomic Context describing neighboring genes Neighboring gene BAF nuclear assembly factor 1 Neighboring gene solute carrier family 3 member 2b Neighboring gene pyruvate carboxylase a Neighboring gene uncharacterized LOC101883097 Neighboring gene uncharacterized LOC101883049 Neighboring gene leucine rich repeat and fibronectin type III domain containing 4a

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
calmodulin 3b (phosphorylase kinase, delta)
Names
CALMx1
CaM Gamma 2
NP_955864.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_199570.1NP_955864.1  calmodulin 3b (phosphorylase kinase, delta)

    See identical proteins and their annotated locations for NP_955864.1

    Status: PROVISIONAL

    Source sequence(s)
    BC044434
    UniProtKB/Swiss-Prot
    Q4V949, Q6PI52
    UniProtKB/TrEMBL
    B2GQW3
    Related
    ENSDARP00000065391.4, ENSDART00000065392.6
    Conserved Domains (1) summary
    PTZ00184
    Location:1149
    PTZ00184; calmodulin; Provisional

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007132.7 Reference GRCz11 Primary Assembly

    Range
    26726968..26732088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)