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Krn Keren [ Drosophila melanogaster (fruit fly) ]

Gene ID: 326198, updated on 10-May-2024

Summary

Official Symbol
Krnprovided by FlyBase
Official Full Name
Kerenprovided by FlyBase
Primary source
FLYBASE:FBgn0052179
Locus tag
Dmel_CG32179
See related
AllianceGenome:FB:FBgn0052179
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG32179; CG8056; CT19073; Dmel\CG32179; gritz; Ker; keren; keren/spitz2; krn; KRN; s-krn; skrn
Summary
Enables receptor ligand activity. Involved in several processes, including epidermal growth factor receptor signaling pathway; olfactory learning; and positive regulation of border follicle cell migration. Located in endoplasmic reticulum and extracellular space. Is expressed in adult mushroom body; embryonic/larval mushroom body; intestinal stem cell; midgut imaginal island; and organism. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Krn in Genome Data Viewer
Location:
74E4-74E4; 3-45 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17649562..17654280, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17642662..17647380, complement)

Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Protein on ecdysone puffs Neighboring gene uncharacterized protein Neighboring gene Nedd4 family interacting protein Neighboring gene uncharacterized protein Neighboring gene CREB-regulated transcription coactivator Neighboring gene small non-coding RNA 641

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables epidermal growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 
enables receptor ligand activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables receptor ligand activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endoplasmic reticulum IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
keren
Names
CG32179-PA
Krn-PA
spitz-2
spitz2

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_037436.4 Reference assembly

    Range
    17649562..17654280 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079405.4NP_524129.1  keren [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524129.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VVJ6
    Related
    FBpp0074961