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Gsc Goosecoid [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33240, updated on 10-May-2024

Summary

Official Symbol
Gscprovided by FlyBase
Official Full Name
Goosecoidprovided by FlyBase
Primary source
FLYBASE:FBgn0010323
Locus tag
Dmel_CG2851
See related
AllianceGenome:FB:FBgn0010323
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
60Mun1; 60Mun2; CG2851; D-gsc; D-Gsc; Dmel\CG2851; gsc; GSC; l(2)05341; M72; Pph25; PPH25
Summary
Enables DNA-binding transcription repressor activity, RNA polymerase II-specific; protein heterodimerization activity; and protein homodimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is expressed in several structures, including adult protocerebrum; embryonic/larval central nervous system; embryonic/larval gut; presumptive embryonic/larval system; and procephalic neurogenic region. Orthologous to human GSC (goosecoid homeobox) and GSC2 (goosecoid homeobox 2). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See Gsc in Genome Data Viewer
Location:
21E2-21E2; 2-1.5 cM
Exon count:
4
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (583540..594685, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (583544..594685, complement)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene coiled Neighboring gene Prothoracicotropic hormone Neighboring gene PvuII-PstI homology 13 Neighboring gene long non-coding RNA:CR46148 Neighboring gene long non-coding RNA:CR43648 Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General protein information

Preferred Names
goosecoid
Names
CG2851-PC
CG2851-PD
CG2851-PE
Gsc-PC
Gsc-PD
Gsc-PE
muenster 72
NP_001137762.2
  • non-AUG (AUU) translation initiation

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    583540..594685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001316376.1NP_001303305.1  goosecoid, isoform E [Drosophila melanogaster]

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0S0WGV8
    Conserved Domains (1) summary
    cl00084
    Location:1930
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
  2. NM_057601.3NP_476949.2  goosecoid, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476949.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P54366, Q9VPR9
    Conserved Domains (1) summary
    pfam00046
    Location:285338
    Homeobox; Homeobox domain
  3. NM_001144290.2NP_001137762.2  goosecoid, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001137762.2

    Status: REVIEWED

    UniProtKB/TrEMBL
    B7Z003, Q0IGU0
    Conserved Domains (1) summary
    pfam00046
    Location:343396
    Homeobox; Homeobox domain