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Pex12 Peroxin 12 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33256, updated on 11-Apr-2024

Summary

Official Symbol
Pex12provided by FlyBase
Official Full Name
Peroxin 12provided by FlyBase
Primary source
FLYBASE:FBgn0031282
Locus tag
Dmel_CG3639
See related
AllianceGenome:FB:FBgn0031282
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG3639; DmelPex12; Dmel\CG3639; pex12; PEX12
Summary
Predicted to enable ubiquitin protein ligase activity. Involved in peroxisome organization; spermatid development; and spermatocyte division. Located in peroxisome. Is expressed in adult head. Human ortholog(s) of this gene implicated in peroxisomal biogenesis disorder and peroxisome biogenesis disorder 3A. Orthologous to human PEX12 (peroxisomal biogenesis factor 12). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See Pex12 in Genome Data Viewer
Location:
21E2-21E2; 2-1.5 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (815993..818096)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (815993..818096)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene Nnf1b Neighboring gene DEAD box protein 21E2 Neighboring gene SAGA factor-like TAF6 Neighboring gene uncharacterized protein Neighboring gene Post-GPI attachment to proteins 2 Neighboring gene Clipper Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables ubiquitin protein ligase activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables ubiquitin-protein transferase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in peroxisome organization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in peroxisome organization ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
involved_in protein import into peroxisome matrix IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in protein import into peroxisome matrix IEA
Inferred from Electronic Annotation
more info
 
involved_in protein monoubiquitination IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in spermatid development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in spermatocyte division IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of peroxisomal importomer complex IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in peroxisomal membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in peroxisomal membrane IEA
Inferred from Electronic Annotation
more info
 
located_in peroxisome IDA
Inferred from Direct Assay
more info
PubMed 
located_in peroxisome ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 

General protein information

Preferred Names
peroxin 12
Names
CG3639-PA
CG3639-PB
Pex12-PA
Pex12-PB

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    815993..818096
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001272915.1NP_001259844.1  peroxin 12, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259844.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q4V3Q4, Q9VPT5
    UniProtKB/TrEMBL
    M9PBP1
    Conserved Domains (2) summary
    pfam04757
    Location:24209
    Pex2_Pex12; Pex2 / Pex12 amino terminal region
    pfam13639
    Location:242281
    zf-RING_2; Ring finger domain
  2. NM_134702.3NP_608546.1  peroxin 12, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608546.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q4V3Q4, Q9VPT5
    UniProtKB/TrEMBL
    M9PBP1
    Related
    FBpp0077675
    Conserved Domains (2) summary
    pfam04757
    Location:24209
    Pex2_Pex12; Pex2 / Pex12 amino terminal region
    pfam13639
    Location:242281
    zf-RING_2; Ring finger domain