U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CG13949 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33266, updated on 10-May-2024

Summary

Go to the top of the page Help
Official Symbol
CG13949provided by FlyBase
Primary source
FLYBASE:FBgn0031288
Locus tag
Dmel_CG13949
See related
AllianceGenome:FB:FBgn0031288
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
BcDNA:AT06839; Dmel\CG13949
Summary
Is expressed in embryonic/larval muscle system and embryonic/larval somatic muscle cell. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CG13949 in Genome Data Viewer
Location:
21E2-21E2; 2-1.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (855337..856639)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (855337..856639)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene kraken Neighboring gene long non-coding RNA:CR45345 Neighboring gene mir-375 stem loop Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Computational identification of Drosophila microRNA genes. Lai EC, et al. Genome Biol, 2003. PMID 12844358, Free PMC Article
  2. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article
  3. A protein interaction map of Drosophila melanogaster. Giot L, et al. Science, 2003 Dec 5. PMID 14605208
  4. A genome-wide Drosophila screen for heat nociception identifies α2δ3 as an evolutionarily conserved pain gene. Neely GG, et al. Cell, 2010 Nov 12. PMID 21074052, Free PMC Article
  5. Systematic genetic analysis of muscle morphogenesis and function in Drosophila. Schnorrer F, et al. Nature, 2010 Mar 11. PMID 20220848

See all (20) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

Go to the top of the page Help
Products Interactant Other Gene Complex Source Pubs Description

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein
Names
CG13949-PA
CG13949-PB
CG13949-PC

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    855337..856639
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_134708.2 → NP_608552.1  uncharacterized protein Dmel_CG13949, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_608552.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T4I1, Q9VPU5
    Related
    FBpp0077682, FBtr0078017

  2. NM_001272920.1 → NP_001259849.1  uncharacterized protein Dmel_CG13949, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259849.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T4I1, Q9VPU5

  3. NM_001272919.1 → NP_001259848.1  uncharacterized protein Dmel_CG13949, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001259848.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q8T4I1, Q9VPU5
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8T4I1 Q8T4I1
Q9VPU5 Q9VPU5

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous