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Lsp1beta Larval serum protein 1 beta [ Drosophila melanogaster (fruit fly) ]

Gene ID: 33274, updated on 10-May-2024

Summary

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Official Symbol
Lsp1betaprovided by FlyBase
Official Full Name
Larval serum protein 1 betaprovided by FlyBase
Primary source
FLYBASE:FBgn0002563
Locus tag
Dmel_CG4178
See related
AllianceGenome:FB:FBgn0002563
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG4178; DmeLSP1b; Dmel\CG4178; LSP 1; LSP-1; LSP-1 beta; Lsp-1b; Lsp-1beta; LSP-1beta; Lsp1; LSP1; Lsp1 beta; Lsp1-beta; Lsp1b; LSP1beta; Lsp1[beta]
Summary
Part of larval serum protein complex. Is expressed in adult head; adult heart; embryonic/larval fat body; photoreceptor cell; and spermatozoon. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
all
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Genomic context

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See Lsp1beta in Genome Data Viewer
Location:
21E2-21E2; 2-1.5 cM
Exon count:
2
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (898500..901316)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (898500..901316)

Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene neither inactivation nor afterpotential A Neighboring gene long non-coding RNA:CR45348 Neighboring gene small Cajal body-specific RNA : MeU1-A24 Neighboring gene small nuclear RNA U1 at 21D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Quantitative in situ hybridization reveals extent of sequence homology between related DNA sequences in Drosophila melanogaster. Brock HW, et al. Chromosoma, 1981. PMID 6791899
  2. Cis-acting sequences sufficient for correct tissue and temporal specificity of larval serum protein 1 genes of Drosophila. Delaney SJ, et al. EMBO J, 1987 Dec 1. PMID 16453814, Free PMC Article
  3. The Drosophila Lsp-1 beta gene. A structural and phylogenetic analysis. Massey HC Jr, et al. Eur J Biochem, 1997 Apr 1. PMID 9128742
  4. Linkage of a Drosophila melanogaster U1 small nuclear RNA gene to the larval serum protein 1-beta gene. McClelland A. J Mol Biol, 1985 Oct 5. PMID 3932658
  5. Location of the LSP-1 Genes in Drosophila Species by IN SITU Hybridization. Brock HW, et al. Genetics, 1983 Jan. PMID 17246102, Free PMC Article

See all (99) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by FlyBase

Component Evidence Code Pubs
part_of larval serum protein complex IDA
Inferred from Direct Assay
more info
 PubMed 

General protein information

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Preferred Names
larval serum protein 1 beta
Names
CG4178-PA
CG4178-PB
Lsp1beta-PA
Lsp1beta-PB
larval serum protein 1
larval serum protein 1[beta]
larval serum protein 1beta

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033779.5 Reference assembly

    Range
    898500..901316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001298627.1 → NP_001285556.1  larval serum protein 1 beta, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001285556.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P11996, Q29R17, Q9VPV2
    UniProtKB/TrEMBL
    X2J8F5
    Conserved Domains (3) summary
    pfam00372
    Location:161 → 496
    Hemocyanin_M; Hemocyanin, copper containing domain
    pfam03722
    Location:32 → 154
    Hemocyanin_N; Hemocyanin, all-alpha domain
    pfam03723
    Location:505 → 755
    Hemocyanin_C; Hemocyanin, ig-like domain

  2. NM_057276.4 → NP_476624.1  larval serum protein 1 beta, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_476624.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P11996, Q29R17, Q9VPV2
    UniProtKB/TrEMBL
    X2J8F5
    Related
    FBpp0077690
    Conserved Domains (3) summary
    pfam00372
    Location:161 → 496
    Hemocyanin_M; Hemocyanin, copper containing domain
    pfam03722
    Location:32 → 154
    Hemocyanin_N; Hemocyanin, all-alpha domain
    pfam03723
    Location:505 → 755
    Hemocyanin_C; Hemocyanin, ig-like domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P11996.3 P11996
X2J8F5 X2J8F5

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