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CGV04_gp1 ORF1/ORF2 fusion protein [ Antonospora locustae virus 1 ]

Gene ID: 33349965, updated on 1-Aug-2022

Summary

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Gene symbol
CGV04_gp1
Gene description
ORF1/ORF2 fusion protein
Locus tag
CGV04_gp1
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Antonospora locustae virus 1 (nat-host: Antonospora locustae ATCC-30860 (Canning))
Lineage
Viruses; dsRNA viruses; Amalgaviridae; unclassified Amalgaviridae
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Genomic context

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Sequence:
NC_035189.1 (5..3182)

NC_035189.1Genomic Context describing neighboring genes Neighboring gene ORF1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_035189.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Amalga-like virus infecting Antonospora locustae, a microsporidian pathogen of grasshoppers, plus related viruses associated with other arthropods. Pyle JD, et al. Virus Res, 2017 Apr 2. PMID 28267607, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Miscellaneous features

  • Loc: 107-109 possible ORF1p and/or ORF1/ORF2 fusion protein start codon
  • Loc: 35-37 possible ORF1p and/or ORF1/ORF2 fusion protein start codon
  • Loc: 776-782 putative +1 slippery sequence, UUU_CUU_G; translation of codon UUU followed by translation of codon UUG function = +1 programmed ribosomal frameshifting
  • Loc: 80-82 possible ORF1p and/or ORF1/ORF2 fusion protein start codon

General protein information

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Preferred Names
ORF1/ORF2 fusion protein
YP_009389417.1
  • nts 1-258 translated from ORF1, nts 259-1058 from ORF2; by convention the first in-frame AUG codon in ORF1 (nts 5-7) is identified as the translational start site

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_035189.1 Reference assembly

    Range
    5..3182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_009389417.1 ORF1/ORF2 fusion protein [Antonospora locustae virus 1]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A218KIR8
    Conserved Domains (1) summary
    cl02808
    Location:506 → 721
    RT_like; Reverse transcriptase (RT, RNA-dependent DNA polymerase)_like family. An RT gene is usually indicative of a mobile element such as a retrotransposon or retrovirus. RTs occur in a variety of mobile elements, including retrotransposons, retroviruses, group ...
Nucleotide Protein
Heading Accession and Version

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